Pairwise Alignments

Query, 454 a.a., RNA helicase (NCBI) from Escherichia coli BW25113

Subject, 473 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  494 bits (1271), Expect = e-144
 Identities = 259/421 (61%), Positives = 316/421 (75%), Gaps = 6/421 (1%)

Query: 1   MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
           M F  LGL  +ILRA+AEQGY EPTPIQQQAIPAVL GRDLMA AQTGTGKTAGFTLP+L
Sbjct: 1   MLFTDLGLKAEILRAIAEQGYTEPTPIQQQAIPAVLAGRDLMACAQTGTGKTAGFTLPIL 60

Query: 61  QHLITRQ----PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSIN 116
           Q L   Q    P  +  R  R LIL PTRELA Q+ E+VR Y ++L ++S+ +FGGV +N
Sbjct: 61  QLLSQAQAGESPLNRLARKPRVLILAPTRELALQVEESVRTYGQHLPLKSMSMFGGVGMN 120

Query: 117 PQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK 176
           PQ+  L+ GVD+LVA PGRLLD  +Q  + L  +EILVLDEADRMLDMGFI DIR++L  
Sbjct: 121 PQIAALKRGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMGFIRDIRKILAL 180

Query: 177 LP--AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE 234
           LP   KRQNLLFSATFSD+IK LA   LH+P  IEVARRNT  + V+Q V  VD+++K++
Sbjct: 181 LPPNGKRQNLLFSATFSDEIKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKD 240

Query: 235 LLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSG 294
           +L H+     W QVL+FTRTKHGA+ L+ +L+K+GIRSAA+HGNK+QGAR RAL +FK G
Sbjct: 241 VLLHLFENRGWNQVLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQGARVRALTEFKEG 300

Query: 295 DIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEH 354
            +  LVATDIAARG+DI++LP+VVNYELPNV EDYVHRIGRTGRA A GEA+SLVC DE 
Sbjct: 301 KLVALVATDIAARGIDIDQLPYVVNYELPNVAEDYVHRIGRTGRAGAEGEAISLVCHDER 360

Query: 355 KLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGE 414
             LR IE+L+KK++ +  +PG+EP  +    P QN   QR G G+ QG  +GQ QP R  
Sbjct: 361 DNLRSIERLIKKDLEKEVLPGFEPSANPTPAPPQNRGGQRQGQGQRQGQRQGQGQPGRSF 420

Query: 415 G 415
           G
Sbjct: 421 G 421