Pairwise Alignments

Query, 454 a.a., RNA helicase (NCBI) from Escherichia coli BW25113

Subject, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  425 bits (1093), Expect = e-123
 Identities = 236/453 (52%), Positives = 297/453 (65%), Gaps = 15/453 (3%)

Query: 1   MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
           M+F  L L P +L A+   GY+ PTP+Q++AIPAVL G DLMA+AQTGTGKTA F LPLL
Sbjct: 1   MTFADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLL 60

Query: 61  QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120
           Q L    P        RALIL PTRELA Q+ ++   Y ++L +RS  V+GGVSINPQMM
Sbjct: 61  QRL-AHDPEPTASNSTRALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSINPQMM 119

Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180
           KLR GVD+LVATPGRLLDL  QNAV+ DQV  LVLDEADRMLD+GF  ++  +   LP +
Sbjct: 120 KLRKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLPKQ 179

Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240
           RQ LLFSATFSD I+++A++LL  PL IE AR N  +  + Q V  VDKKRK  L  H+ 
Sbjct: 180 RQTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCHLY 239

Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300
               W QVLVF +T+ G + L E L   GI + +IHG+K Q AR RAL  FK+G +RVLV
Sbjct: 240 KHKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRVLV 299

Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360
           ATD+A+RGLDI++LP VVN++LP VPEDYVHRIGRT RA A+GEA+SLVC DE  LL  I
Sbjct: 300 ATDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLGAI 359

Query: 361 EKLLKKEIPRIAIPGYEPDPSI-----KAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415
           E L+ + + RI   G+EPD  +       + I+  ++ +       G G G   P RG+G
Sbjct: 360 EVLIGQPLSRIEQHGFEPDHRVPETGPAGQVIKKPKKPKMPKHLDYGIGSG---PSRGKG 416

Query: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448
                    A+ P  R G  +P G+   + R R
Sbjct: 417 PGS------AKAPGGRRGAGRPGGKAAPKARGR 443