Pairwise Alignments

Query, 454 a.a., RNA helicase (NCBI) from Escherichia coli BW25113

Subject, 457 a.a., ATP-dependent RNA helicase RhlE from Pantoea sp. MT58

 Score =  701 bits (1808), Expect = 0.0
 Identities = 364/454 (80%), Positives = 396/454 (87%), Gaps = 2/454 (0%)

Query: 1   MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
           MSFDSLGLS DILRAVAEQGY EPTPIQ+QAIP VL GRDL+ASAQTGTGKTAGFTLPLL
Sbjct: 1   MSFDSLGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLL 60

Query: 61  QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120
           Q L       +GRRPVRALILTPTRELAAQ+GENV DYSKYL++RS+VVFGGVSINPQM+
Sbjct: 61  QKLSATATPIRGRRPVRALILTPTRELAAQVGENVSDYSKYLSLRSMVVFGGVSINPQMV 120

Query: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180
           KLRGGVD+LVATPGRLLDL  QNAV L QVE+LVLDEADRMLDMGFIHDIRRVL +LPAK
Sbjct: 121 KLRGGVDILVATPGRLLDLAQQNAVDLSQVEVLVLDEADRMLDMGFIHDIRRVLARLPAK 180

Query: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240
           RQNLLFSATFSD+IK LAEKLL NP  IEVARRNTAS+QV Q V FVDKKRKRELLS +I
Sbjct: 181 RQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKRELLSQLI 240

Query: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300
           G+GNWQQVLVFTRTKHGANHLAEQL KDGI +AAIHGNKSQGARTRALADFKSG IRVLV
Sbjct: 241 GEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIRVLV 300

Query: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360
           ATDIAARGLDIEELPHVVNYELPNV EDYVHRIGRTGRAAATG ALSLVCVDEHKLLRDI
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDI 360

Query: 361 EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA 420
           E+LLK+EIPR+A+ GYEPDPSIKAEPI NGRQQ+  GG G GGGRG+ Q  +G G ++S+
Sbjct: 361 ERLLKREIPRLAVEGYEPDPSIKAEPIINGRQQQSRGGAG-GGGRGRGQGGQGAGASRSS 419

Query: 421 SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ 454
           S+      +RR   A P G++    RPR+PA A+
Sbjct: 420 SSGDKRPQARRQSQAAPQGDKP-ASRPRRPAVAK 452