Pairwise Alignments

Query, 454 a.a., RNA helicase (NCBI) from Escherichia coli BW25113

Subject, 559 a.a., DEAD/DEAH box helicase from Ralstonia sp. UNC404CL21Col

 Score =  563 bits (1450), Expect = e-165
 Identities = 290/460 (63%), Positives = 354/460 (76%), Gaps = 12/460 (2%)

Query: 1   MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
           MSF  LGLS  ++RAVAE GY EPTPIQ+QAIPA+L+G DL+A AQTGTGKTAGFTLPLL
Sbjct: 1   MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL 60

Query: 61  QHLITRQPHA----KGRR-PVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115
             L   QP+     +G R P+RAL+LTPTRELAAQ+ E+VR Y KYL ++S+V+FGGV I
Sbjct: 61  HRLSASQPNKVQTPQGMRFPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI 120

Query: 116 NPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLT 175
           NPQ+  L+ GVD++VATPGRLLD   Q  + L  +E+LVLDEADRMLDMGFIHDIR++L 
Sbjct: 121 NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN 180

Query: 176 KLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKREL 235
            LP KRQNLLFSATFSDDI+ LA++LL  P  IEVARRNT ++ V Q ++ VD++RKREL
Sbjct: 181 ILPPKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKREL 240

Query: 236 LSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295
           L+ ++   +W QVLVFTRTKHGAN LAEQL +DGI + AIHGNKSQ ARTRAL +FK+G 
Sbjct: 241 LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALTEFKAGT 300

Query: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355
           +RVLVATDIAARG+DI++LPHVVN++LPNVPEDYVHRIGRTGRA A GEA+SLVCVDEH 
Sbjct: 301 LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG 360

Query: 356 LLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG---GGRGQQQPRR 412
           LLRDIE+L+K+E+PR  + G+EPDP+I AEPI NGR   G GG  +G   GG   QQPR+
Sbjct: 361 LLRDIERLIKRELPRTVLEGFEPDPTIAAEPIPNGRNSAGRGGNARGGRPGGGRSQQPRQ 420

Query: 413 GEGGA----KSASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448
             G A      A  +P E      G+ +  G+ Q + + R
Sbjct: 421 ASGNAAPREPRAPREPREPRRESSGNGQGQGQNQGQGQGR 460