Pairwise Alignments

Query, 379 a.a., cytochrome d terminal oxidase, subunit II (NCBI) from Escherichia coli BW25113

Subject, 334 a.a., quinol oxidase subunit II transmembrane protein from Sinorhizobium meliloti 1021

 Score =  177 bits (450), Expect = 3e-49
 Identities = 113/364 (31%), Positives = 172/364 (47%), Gaps = 37/364 (10%)

Query: 7   LRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLIT 66
           L  IW  ++   ++ + V DGFD+GVG+L  F      +R +M+NS+AP WDGN+ WL+ 
Sbjct: 5   LPLIWAAIIAFAVLAYVVLDGFDLGVGILFPFFPEKH-DRDVMMNSVAPVWDGNETWLVL 63

Query: 67  AGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIG 126
            GG L A +P+ YA      Y  +I +L  L FR V F+YR + +  R   +W+W    G
Sbjct: 64  GGGGLLAVFPLAYATILPALYAPIIAMLIGLIFRGVAFEYRWRTQ--RGEFLWNWAFAGG 121

Query: 127 SFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGAT 186
           S +     G+A G L+QG+P          Y G ++  L PF +  G+  V      GAT
Sbjct: 122 SMLAAFAQGLALGALVQGIPVE-----NRAYVGGWWDWLTPFSIATGLAIVIGYALLGAT 176

Query: 187 YLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNK 246
           +L M+T GEL  R R  A   AL T+    +  +W  +                   L  
Sbjct: 177 WLVMKTRGELAERARGVALRTALATVAAMGIVSLWTPF-------------------LEP 217

Query: 247 EVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTA 306
             +     W     +  ++  +  LG +  LL  +  R D   +        L  I +  
Sbjct: 218 VYLERWFGWPTAIFS--VIVPLLVLGCLYLLLKGIRDRHDVQPFIAALGLFVLGYIGI-- 273

Query: 307 GIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRI 366
           GI+ +PF++P       SLT+WDA +   +L  +   A+VLVP+IL YTA+ YW   G++
Sbjct: 274 GISFYPFMVP------PSLTIWDAAAPDESLAFLLVGALVLVPMILTYTAYAYWVFRGKV 327

Query: 367 TKED 370
             E+
Sbjct: 328 DPEE 331