Pairwise Alignments

Query, 379 a.a., cytochrome d terminal oxidase, subunit II (NCBI) from Escherichia coli BW25113

Subject, 333 a.a., cytochrome d ubiquinol oxidase, subunit II from Marinobacter adhaerens HP15

 Score =  176 bits (445), Expect = 1e-48
 Identities = 111/360 (30%), Positives = 169/360 (46%), Gaps = 39/360 (10%)

Query: 7   LRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLIT 66
           L  IW  ++G  +I + + DGFD+GVG+L  F   N+  R  M+NS+AP WDGN+ WL+ 
Sbjct: 6   LPLIWAFIIGFGIIMYVLMDGFDLGVGILFPF-APNEEARDTMMNSVAPVWDGNETWLVL 64

Query: 67  AGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIG 126
            G  L AA+PMVY+      Y+ + L+LA L FR V F++R K   +R+  +W+W    G
Sbjct: 65  GGAGLLAAFPMVYSIFLPALYIGVFLLLAGLIFRGVAFEFRFKARTSRY--LWNWAFAGG 122

Query: 127 SFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGAT 186
           S V     G   G  +QG      E     Y G     L PF +L G+  +      G+T
Sbjct: 123 STVASFAQGAVVGAYIQGF-----ETANGVYVGGALDWLTPFTVLTGLGMLAGYSLLGST 177

Query: 187 YLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNK 246
           +L M+T G L            L  LV F + GVW                     P   
Sbjct: 178 WLIMKTEGYLQQWAYKITLPLLLAVLVVFGIIGVW--------------------TPFVD 217

Query: 247 EVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTA 306
           E+VRE   W   F+N  I+W +P L ++  +    + R  +    FV +        L  
Sbjct: 218 EMVRE--RW---FSNLSIIWVLPVLTLLCAIQIYRSVRDRRDGMPFVATMGLFITTYLGL 272

Query: 307 GIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRI 366
            ++ +P+V+P         T+W+A S+  +   +    + ++PI+L+YTAW YW   G++
Sbjct: 273 VVSRWPYVVP------PEYTLWEAASAYESQLFLLLGLLFVIPIVLVYTAWTYWVFRGKV 326