Pairwise Alignments

Query, 379 a.a., cytochrome d terminal oxidase, subunit II (NCBI) from Escherichia coli BW25113

Subject, 334 a.a., cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein from Paraburkholderia bryophila 376MFSha3.1

 Score =  156 bits (394), Expect = 9e-43
 Identities = 114/375 (30%), Positives = 175/375 (46%), Gaps = 65/375 (17%)

Query: 10  IWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGG 69
           +W  ++ + L  + V DGFD+G+G++  F    ++ER +M+N++AP WDGN+ WL+  G 
Sbjct: 6   VWAAIIALGLFMYVVLDGFDLGIGIVFPFFPE-ESERDLMMNTVAPVWDGNETWLVLGGA 64

Query: 70  ALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIGSFV 129
           ALFA +PMVY+   S  Y+ +I +L  L FR V F+ R+K   T  ++MWD     GS  
Sbjct: 65  ALFAVFPMVYSTVLSALYLPLIFMLVCLIFRGVSFEIRAKANRT--KHMWDLAFIGGSAG 122

Query: 130 PPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQ---GAT 186
                GV  G  LQG+P      +   Y G+ F  L PF LL G   +G+I+T    G  
Sbjct: 123 ATFFQGVVLGAFLQGIP-----VIDGAYAGDAFGWLTPFSLLTG---LGLIVTYALLGCC 174

Query: 187 YLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWV---------MYGIDG--YVVKSTM 235
           +L  +T G+L  R         +V L   A+  +W           +  DG  Y +    
Sbjct: 175 WLIAKTEGDLQRRLHRVVWPLTVVLLGFIAMVSLWTPLQDPNIAQRWFHDGLFYRLLPVP 234

Query: 236 DHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFS 295
              AA   L +  VRE        +NTP          VL LL +L            ++
Sbjct: 235 FMVAACAVLMRRAVRE------RHHNTPF---------VLALLLVLLG----------YA 269

Query: 296 SLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYT 355
            L          ++++P+ +PS      S+T+WDA + + +       A V++PII+ YT
Sbjct: 270 GLL---------VSLWPYAIPS------SVTLWDAAAPRSSQTFTLVGAAVILPIIIAYT 314

Query: 356 AWCYWKMFGRITKED 370
              YW   G++   D
Sbjct: 315 TMGYWVFRGKVRHGD 329