Pairwise Alignments

Query, 379 a.a., cytochrome d terminal oxidase, subunit II (NCBI) from Escherichia coli BW25113

Subject, 379 a.a., cytochrome d ubiquinol oxidase, subunit II (RefSeq) from Shewanella sp. ANA-3

 Score =  532 bits (1370), Expect = e-156
 Identities = 250/379 (65%), Positives = 299/379 (78%)

Query: 1   MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGN 60
           M DYE+LR IWW L+GVL IGFAVTDGFDMGVG L   +G++DTERRIM+N+IAPHWDGN
Sbjct: 1   MFDYEILRVIWWALIGVLFIGFAVTDGFDMGVGALLPIIGKDDTERRIMVNTIAPHWDGN 60

Query: 61  QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWD 120
           QVWLITAGGALFAAWPMVYA +FSGFYVAM+LVL +L+ RPVGFDYRSKIE  +WR  WD
Sbjct: 61  QVWLITAGGALFAAWPMVYAVSFSGFYVAMMLVLFALYTRPVGFDYRSKIENPKWRKSWD 120

Query: 121 WGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMI 180
           W +F G F+PPL+IGVAFGNLLQGVPFN DE+LR  Y G  F LLNPFGLLAG+VSV M 
Sbjct: 121 WALFCGGFIPPLIIGVAFGNLLQGVPFNFDEFLRATYHGGLFGLLNPFGLLAGLVSVSMF 180

Query: 181 ITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAA 240
           + QGA +LQM+T GEL +R     Q+ AL+  V FA AGVW+  GIDGYV+ ST+DH+A 
Sbjct: 181 MMQGAAWLQMKTDGELRVRAANATQLCALLVAVLFAAAGVWLANGIDGYVITSTLDHHAL 240

Query: 241 SNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLA 300
           SNP  K V  E+GAWL N++  PI    P LGV LPLL IL +R++++ +AF+FSSLT+A
Sbjct: 241 SNPTLKTVAVESGAWLANYDKYPITMLFPVLGVALPLLVILVSRLNRSGFAFLFSSLTVA 300

Query: 301 CIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYW 360
            +ILT G AMFPFVMPSS   N SLTMWDAT+S++TL VMTW A++ VPI+L YT W Y+
Sbjct: 301 MVILTCGAAMFPFVMPSSLDPNVSLTMWDATASEMTLTVMTWAAIIFVPIVLSYTVWTYF 360

Query: 361 KMFGRITKEDIERNTHSLY 379
           KMFGR+ ++ IE N  SLY
Sbjct: 361 KMFGRLNRKHIEDNKASLY 379