Pairwise Alignments

Query, 522 a.a., cytochrome d terminal oxidase, polypeptide subunit I (VIMSS) from Escherichia coli BW25113

Subject, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  744 bits (1922), Expect = 0.0
 Identities = 360/514 (70%), Positives = 428/514 (83%)

Query: 1   MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60
           M+D+VELSRLQFALTAM+HFLFVPLT+GM+ LLAIME++YVL+GKQIY+DMT+FWGKLFG
Sbjct: 5   MIDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFG 64

Query: 61  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120
           INFALGV TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIE L+AFFLESTFVGLFFFGW R
Sbjct: 65  INFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSR 124

Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180
           L K QH+ +TWLVALGS+ SALWILVANGWMQNP+ ++FN++TMRMEM SF+E+VLNPVA
Sbjct: 125 LSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVA 184

Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240
           QVKF+HTVAS Y  GAMFILG+S++Y+L+GRD  FA+RSFAIAA+FGMAA++SVIVLGDE
Sbjct: 185 QVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDE 244

Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300
           SGY++GDVQK KLAAIEAEW T+PAPAAFTLFG+P+Q+E    +AI+IPY +G+IATRS 
Sbjct: 245 SGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSF 304

Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360
           D  V GL +L  +H  RIRNGM AY LLE+L++G      + +F   K DLGYGLLLKRY
Sbjct: 305 DEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGLLLKRY 364

Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420
           T  + DA EAQIQQA  DS+P V PL+++FRIMV CGF++L +   +     R RI  K 
Sbjct: 365 TDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITHKP 424

Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480
           W+L+AAL+ IPLPWIA+EAGWFVAEYGRQPWAIGEVLP  VA SS T  +LI S+ +I  
Sbjct: 425 WVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAIILS 484

Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQS 514
           LYT+F+  E +L+   AR GPSSLKTGRY  EQS
Sbjct: 485 LYTVFIFVESYLIVTVARKGPSSLKTGRYQDEQS 518