Pairwise Alignments

Query, 522 a.a., cytochrome d terminal oxidase, polypeptide subunit I (VIMSS) from Escherichia coli BW25113

Subject, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  800 bits (2065), Expect = 0.0
 Identities = 388/519 (74%), Positives = 451/519 (86%)

Query: 1   MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60
           M+D+V+LSRLQFALTAMYHFLFVPLTLGMAFLLAIME++YV++ KQIYKDMTKFWGKLFG
Sbjct: 14  MIDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFG 73

Query: 61  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120
           INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIE L+AFFLESTFVGLFFFGWDR
Sbjct: 74  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDR 133

Query: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180
           L K QH+ VTWLVALGSN SALWILVANGWMQNP+ S+FNFETMRMEMVSF+++VLNPVA
Sbjct: 134 LSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVA 193

Query: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240
           QVKFVHTVA+GY TGAMFILGISA+Y+LKGRD AFA+RSFAIAASFGMA+VLSVIVLGDE
Sbjct: 194 QVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDE 253

Query: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300
           SGYE+G+VQ+ KLAAIE+EW T+PAPAAFTLFGIP+QEE    +AI+IP+ALGIIATRS+
Sbjct: 254 SGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313

Query: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360
           D  V+GL++L  +H ERIR G+ AY LLE+LR+G         F+ +K DLGYGLLLKRY
Sbjct: 314 DEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRY 373

Query: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420
           T  V DATE QIQ A  DSIP V PL+++FRIMVACGF++L +   +F    R +I +KK
Sbjct: 374 TDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKK 433

Query: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480
           W+L+AAL+ IPLPWIAVE GWFVAEYGRQPWA+GE+LP  VA S+L+AG++I SM+ I  
Sbjct: 434 WVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILA 493

Query: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519
           LYT+FL+AE++LM KF R GPSSLKTGRYHFEQ + + Q
Sbjct: 494 LYTIFLIAEVYLMVKFTRKGPSSLKTGRYHFEQGAESVQ 532