Pairwise Alignments

Query, 391 a.a., 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (NCBI) from Escherichia coli BW25113

Subject, 402 a.a., UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq) from Shewanella loihica PV-4

 Score =  212 bits (539), Expect = 2e-59
 Identities = 136/392 (34%), Positives = 204/392 (52%), Gaps = 5/392 (1%)

Query: 2   TNQPTEIAIVGGGMVGGALALGLAQHGFAVTVIEHAEPAPFVADSQPDVRISAISAASVS 61
           + Q  ++AI+GGGMVG A A+GL Q G  V VI+  E      +++  +R+SAI+ AS  
Sbjct: 3   STQTYDVAIIGGGMVGLATAIGLGQEGLRVVVIDAGETQAVSGEAR--LRVSAINKASQR 60

Query: 62  LLKGLGVWDAVQAMRCHPYRRLETWEWET-AHVVFDAAELKLPLLGYMVENTVLQQALWQ 120
           LL  LG W  +   R  PY+++  W+ ++   + FDA  +    LG ++EN  +  AL  
Sbjct: 61  LLTHLGAWAYIDESRVGPYQKMAVWDKDSLGKIGFDAHSISEQTLGSIIENDNISHALAT 120

Query: 121 ALEAHPKVTLRVPGSLIALHRHDDLQELELKGGEVIRAKLVIGADGANSQVRQMAGIGVH 180
                 ++T      L  +   +    L L  G+ + A LVIGADGANS VR+   I + 
Sbjct: 121 RAGELSEITHLENHRLEKIAFGEREAWLTLDNGDNLSAALVIGADGANSWVREQCKIPMT 180

Query: 181 AWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPLFD-NWASLVWYDSPARIRQLQN 239
            W Y    ++ S++ E     +  Q F  DGP AFLPLF+ +  S+VW   PA+ + L  
Sbjct: 181 FWDYGHHAIVASIRTELPHNATARQVFLSDGPLAFLPLFEPSLCSIVWSVPPAKAQSLLE 240

Query: 240 MNMAQLQAEIAKHFPSRLGYVT-PLAAGAFPLTRRHALQYVQPGLALVGDAAHTIHPLAG 298
            +  Q +  +   F  +LG  T      AFPL  R+A  + +  L L GDAAHTIHPLAG
Sbjct: 241 GDKVQFERSLTAAFDGKLGMCTLESEPQAFPLRMRYARHFARHRLVLAGDAAHTIHPLAG 300

Query: 299 QGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRYQMRRMADNFIMQSGMDLFYAGFSN 358
           QGVNLG+ D  A+I+ L   ++ G+    Y  L+  +  R AD   M + M+ F   F  
Sbjct: 301 QGVNLGFLDAAAIIETLSELKAKGKDLGDYANLRPLERWRKADALEMIAAMEGFKRLFEG 360

Query: 359 NLPPLRFMRNLGLMAAERAGVLKRQALKYALG 390
           + P  + +R+LGL   +    +K   ++ A+G
Sbjct: 361 SNPVKKALRDLGLNLVDNLSPVKTLFMQQAMG 392