Pairwise Alignments

Query, 555 a.a., membrane protein FdrA (NCBI) from Escherichia coli BW25113

Subject, 290 a.a., succinyl-CoA synthase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 12/179 (6%)

Query: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176
           A  ++I V   +  +   +A+D  + +++  ++ +   D +Q+K +  E G+ ++GP+C 
Sbjct: 66  ATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEETGVRMIGPNCP 125

Query: 177 TSMIAGTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231
             +  G       +MP     +G +G++  SGT   E   Q    G G +  +G+GG   
Sbjct: 126 GVITPGE--CKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGG--- 180

Query: 232 SREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYT 290
              + G + +  LEM   D ++E +  + +    A             KP V+   G T
Sbjct: 181 -DPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKAHVTKPVVSYIAGVT 238