Pairwise Alignments

Query, 433 a.a., putative transport (VIMSS) from Escherichia coli BW25113

Subject, 494 a.a., permease transmembrane protein from Sinorhizobium meliloti 1021

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 89/470 (18%), Positives = 183/470 (38%), Gaps = 80/470 (17%)

Query: 14  GFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAF-----CGHRR 68
           G Q    ++   V VP  +  A QL    +  L         +    Q+       G R 
Sbjct: 23  GIQHVLVMYGGAVAVPLIVGRALQLSPEDVAFLISADLFVCGIVTIIQSLGLTRGIGIRL 82

Query: 69  AIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLAR 128
            +M G      G ++++     +  TP  D A ++   I  +G++ +LI  + +  RL +
Sbjct: 83  PVMMGVTFAAVGPMVSM-----AAMTPGIDGARTIFGAIIGAGLVALLI--APIMGRLLK 135

Query: 129 LFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNF---------------------- 166
            F P V    +L++G  L  +    + G PFG   P                        
Sbjct: 136 FFPPVVTGTIILVIGVTLMRVGVNWIFGNPFGPTAPKLVDPAHAQWLAGLKQLAATGGPA 195

Query: 167 -------------KIQLPPFALSVAVMCLVLAMII--FLPQRFARYGLLVGTITGWLLWY 211
                         I   P  +++A   LV  +++  F     +   +L+G + G +   
Sbjct: 196 VPDGLVLGATVPNPIYAEPGHVALAAFVLVSILVVARFGKGLISNIAVLIGIVIGCV--- 252

Query: 212 FCFPSSHSLSGELHWQ------WF----PLGSGGALSPGIILTAVITGLVNISNTYGAIR 261
                + +L G +H+       WF    PL  G  +   +++  +   ++ +      I 
Sbjct: 253 -----AAALLGMMHFDRVASAGWFAVVTPLRFGMPIFDPVLIATMSLVMIVVM-----IE 302

Query: 262 GTDVFYPQQGAGNTRYRRSFVATGFM-----TLITVPLAVIPFSPFVSSIGLLTQTGDYT 316
            T +F       N   ++  +  G       T+I       P++ F  ++GL+  TG  +
Sbjct: 303 STGMFLALGEMTNREVKQQQLTAGLRVDGLGTIIGGLFNTFPYTSFSQNVGLVGVTGVKS 362

Query: 317 RRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITF--TA 374
           R   + G VI +L+ ++P +  L  ++P  V     LV +  +  + +     + F  + 
Sbjct: 363 RYVCVMGGVIMILLGVIPKMGALVEAVPTFVLGGAGLVMFGMVAATGVRILSTVDFKSSR 422

Query: 375 RNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMD 424
            N++ +A+ +  G+  M + P +L  +P  + P++ +G+++  + AV+++
Sbjct: 423 NNLFVVAVSVGFGLIPM-IAPNFLMWMPHAIHPIIESGIVLAAVSAVVLN 471