Pairwise Alignments

Query, 430 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 476 a.a., amino acid permease from Ralstonia sp. UNC404CL21Col

 Score =  108 bits (269), Expect = 5e-28
 Identities = 109/422 (25%), Positives = 187/422 (44%), Gaps = 29/422 (6%)

Query: 11  KPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSGYAYARLGAS 70
           K LG  ++  +G+GA++G GIF L G  AL    +  ++F    +   F+   YA   ++
Sbjct: 24  KVLGPLDLTFLGVGAIIGTGIFVLTGTGALTAGPALTLSFIVAALACGFAALCYAEFAST 83

Query: 71  YPSNGGIIDFFRRGLGN---GVFSLALSLLY-LLTLAVSIAM------VARAFGAYAVQF 120
            P +G I  +    +G     +    L L Y L T AVS+        +   FG +    
Sbjct: 84  IPVSGSIYTYAYATMGELVAWIIGWDLMLEYGLATSAVSVGWSGYFQSLLSGFGLHLPVA 143

Query: 121 LHEGSQE----EHLILLYALGIIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGV 176
           L          + L  L AL I+ ++T   S       R   I+V IK+ ++LL I  GV
Sbjct: 144 LTAAPGAIPGVQTLFNLPALVIMLLITTLLSFGIRESARANNIMVAIKVTVVLLFIAVGV 203

Query: 177 WSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGV 236
             +QPA+     P      F    I F A+ GF  + +AA++V++P+  +P   + ++ V
Sbjct: 204 RHVQPANWQPFMPFGMEGVFGAAAIVFFAFIGFDAVTSAAEEVRNPKRDLPIGIIGSLAV 263

Query: 237 TTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYV--IVVIGALLATASAIN 294
            T+LY+ +A ++      +   K+A      + +  +    +V   V +GA++   + I 
Sbjct: 264 CTILYVLVAAIM---TGIVPFAKFAGVDHPVSLALQVAGESWVAGFVDLGAIIGMTTVIL 320

Query: 295 ANLFAVFNIMDNMGSERELPKLMNKSLWRQST--WGNIIVVVLIMLMTAALNLGSLASVA 352
              +    I+  M  +  LPK ++    R ST      +V ++  L+ A + L  LA + 
Sbjct: 321 VMAYGQTRIIFAMSRDGLLPKRLSHIHPRYSTPFLNTWVVGIVFALIAAFVPLNVLAELI 380

Query: 353 S----ATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALI 408
           +    A F +  +AV V+  R R D+H        G  V+ L+ +G    L S   +A+ 
Sbjct: 381 NIGTLAAFSLIAVAVLVLR-RTRPDLHRG--FRCPGVPVVPLLAIGLCLFLMSH-LQAVT 436

Query: 409 WI 410
           WI
Sbjct: 437 WI 438



 Score = 24.3 bits (51), Expect = 0.009
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 42  MEASTWVAFAFGGIVAMFSGYAYAR 66
           ++A TW+AF    ++ +   + YAR
Sbjct: 432 LQAVTWIAFVVWVVIGLLVYFGYAR 456