Pairwise Alignments

Query, 159 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 159 a.a., putative transcription regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  101 bits (251), Expect = 6e-27
 Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 3/145 (2%)

Query: 2   TPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVAVNGDMKHLAV 61
           T A +LL+K KI++++  YE D  + +    V   LG N +QV+KTL++  +GD     V
Sbjct: 6   TNAARLLDKAKIAYELIPYEVDENDLS-AIHVAASLGENIEQVFKTLVL--HGDKSGYFV 62

Query: 62  AVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGGISPLGQKKRLPTIIDAPAQ 121
            V P   ++DLK  AKA G KK ++         TGY+ GG SP+G KK  PT I    +
Sbjct: 63  CVIPGEHEVDLKLAAKASGNKKCDLIPVKELLPLTGYIRGGCSPIGMKKHFPTYIHETCR 122

Query: 122 EFATIYVSGGKRGLDIELAAGDLAK 146
           +F  IYVS G RGL I+LA GDL +
Sbjct: 123 QFPYIYVSAGVRGLQIKLAPGDLIR 147