Pairwise Alignments

Query, 1049 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 1070 a.a., multidrug resistance protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 1358 bits (3516), Expect = 0.0
 Identities = 671/1036 (64%), Positives = 844/1036 (81%), Gaps = 3/1036 (0%)

Query: 1    MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT 60
            M  FFIDRP+FAWVIAIIIMLAG L+IL LPV+QYP IAP +V ISASYPGA AKTV+DT
Sbjct: 1    MARFFIDRPVFAWVIAIIIMLAGALSILSLPVSQYPKIAPTSVNISASYPGASAKTVEDT 60

Query: 61   VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ 120
            VTQVIEQ M GID+L YMSS SD+TG V ITLTF++ TD DIAQVQVQNKL LA P+LP+
Sbjct: 61   VTQVIEQKMKGIDSLRYMSSTSDATGQVSITLTFDASTDPDIAQVQVQNKLALATPMLPE 120

Query: 121  EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS 180
             VQ+QG++V KS+SSFLM++ + + D ++T  D+SDY A  + D ISR  GVG+ QLFG+
Sbjct: 121  AVQRQGITVNKSTSSFLMIIALASDDPSLTGRDLSDYAATYLLDPISRVDGVGETQLFGA 180

Query: 181  QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240
            QYAMR+W++P++L  +++TP DV +AI AQN Q++ GQ+GGTP V GQ ++ +I++Q+ L
Sbjct: 181  QYAMRVWLDPHKLMNYRMTPADVRSAITAQNTQISVGQIGGTPAVPGQGMSFTILSQSLL 240

Query: 241  TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL 300
             + E+F +I+L+V QDGS V L DVA++ELG ENYD ++ FNG+P++G+ IKLATGANAL
Sbjct: 241  QTREQFERIVLRVEQDGSTVRLADVARVELGSENYDAVSHFNGKPSTGIAIKLATGANAL 300

Query: 301  DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ 360
            DT   +R  +  +    P G++ V+PYDTTPFV++SI EVVKTL EAI+LVFLVMYLFLQ
Sbjct: 301  DTVKRVRTTMEGLAKNLPEGIRCVFPYDTTPFVRVSIEEVVKTLAEAIVLVFLVMYLFLQ 360

Query: 361  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420
            N RAT+IPTIAVPVVLLGTF  LAAFGFSIN LTMFG+VLAIGLLVDDAIVVVENVER+M
Sbjct: 361  NIRATIIPTIAVPVVLLGTFGALAAFGFSINMLTMFGVVLAIGLLVDDAIVVVENVERIM 420

Query: 421  AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL 480
             EEGLPP+EATRKSMG+I GALVGIA+VLSAVF+PMAF  GS+G IYRQFS+TIVSAM L
Sbjct: 421  TEEGLPPREATRKSMGEITGALVGIALVLSAVFIPMAFIKGSSGVIYRQFSLTIVSAMTL 480

Query: 481  SVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGR 540
            SV+VAL+LTPALCAT LKP+ K +H + + GFFGWFNRMF++++  Y   V G+    GR
Sbjct: 481  SVVVALVLTPALCATFLKPLHKHEH-QAQGGFFGWFNRMFDRTSRGYRKQVTGVTGRVGR 539

Query: 541  YLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLT 600
             + +Y +++ G A+LF+RLP+SFLP+EDQGV  ++VQLP G+ QE+T +VL ++ H+YL 
Sbjct: 540  TMCIYALLLAGTAFLFMRLPTSFLPEEDQGVIFSLVQLPTGSPQEKTLEVLKKLEHHYLV 599

Query: 601  KEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD 660
             EK  V S+F V GF FAGRGQN G+AFV LK W +R GE     A+  RA RAFS+I++
Sbjct: 600  DEKETVNSLFTVAGFSFAGRGQNAGLAFVQLKPWDERKGEGMSAAAVAGRAMRAFSRIRN 659

Query: 661  AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNG 720
            ++V+AF  PA+ ELG A+GF+  L D+ G+GHE L QARNQLL  AA++P  +  +RPNG
Sbjct: 660  SVVYAFTPPAVQELGNASGFNLFLQDREGVGHEALMQARNQLLGMAAQNP-AIAVLRPNG 718

Query: 721  LEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYR 780
            +EDTPQF+ID+D  KA A G+++ D+N  L  A GG+YVNDFIDRGRVKKVY+  +A +R
Sbjct: 719  MEDTPQFRIDVDAAKAGAHGLTMADVNGVLSTALGGAYVNDFIDRGRVKKVYLQGDAPFR 778

Query: 781  MLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEA 840
            M+P+DI  W+VR A G MVPFSAFS++ W YGSPRLERYNGLP++E++G AAPGKSTGEA
Sbjct: 779  MMPEDINAWHVRNAQGNMVPFSAFSTASWTYGSPRLERYNGLPAVELVGSAAPGKSTGEA 838

Query: 841  MELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFS 900
            M+ +E +A+KLP GVG  WTG+SYQER+SG+QAP+LYAIS++VVFLCLAALYESWS+P +
Sbjct: 839  MQAVEDMAAKLPPGVGISWTGLSYQERMSGSQAPALYAISILVVFLCLAALYESWSVPTA 898

Query: 901  VMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGL 960
            V+LVVPLG+IGAL+A   RGL NDV+FQVGLLTTIGL+AKNAILIVEFA  L+ K G+ L
Sbjct: 899  VILVVPLGIIGALMATLGRGLNNDVFFQVGLLTTIGLAAKNAILIVEFAMHLV-KSGRPL 957

Query: 961  IEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIF 1020
            ++AT +A R+RLRPILMTSLAF+LGV+P+ ISTGAGSG+Q A+GTGVMGGM +ATVLA++
Sbjct: 958  LDATAEAARLRLRPILMTSLAFLLGVLPMAISTGAGSGSQRAIGTGVMGGMFSATVLAVY 1017

Query: 1021 FVPVFFVVVRRRFSRK 1036
            FVPVFFV+V R   RK
Sbjct: 1018 FVPVFFVMVYRFAMRK 1033