Pairwise Alignments

Query, 784 a.a., DNA-binding ATP-dependent protease La (NCBI) from Escherichia coli BW25113

Subject, 856 a.a., ATP-dependent protease La, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  767 bits (1981), Expect = 0.0
 Identities = 379/768 (49%), Positives = 550/768 (71%), Gaps = 8/768 (1%)

Query: 10  EIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDLF 69
           E+PVLP+RDVVV+ +M++PLFVGREKS++ ++AA++  + +M+  Q +   D+P  +DL 
Sbjct: 90  ELPVLPVRDVVVFNYMILPLFVGREKSVQAVDAALNGSRYLMVCTQHDEQVDDPTPDDLH 149

Query: 70  TVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLESPTIDER---- 125
             GTV  I++MLK+PDG +KVLV+G+ RA + A +    H SA+   +  P +D      
Sbjct: 150 HTGTVVMIMRMLKMPDGRIKVLVQGVTRAHVDAFTSEEPHISARVTPM--PEVDSGPLTV 207

Query: 126 EQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADKQSVLE 185
           EQE ++RTA  Q E  + L      E+++ LNS+D+P RLAD IAA++ +K++D Q +LE
Sbjct: 208 EQEAMMRTAREQSEKILSLRGISTSEIMSVLNSVDEPGRLADLIAANLRMKVSDAQDILE 267

Query: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
             D   RLE +   +  E ++  ++ +I++  ++ M+K+Q++Y+L EQ+KAI++ELGE  
Sbjct: 268 CVDPVARLELVNKQLMKEAEVASMQAKIQSMAREGMDKAQKDYFLREQLKAIRRELGESG 327

Query: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPWNA 305
           +  +E E L R +D AK+P++ +++A+ +L++L  M P S+EATV R Y++W+ ++PW  
Sbjct: 328 NEDEELEELARALDIAKLPRDVRKEADKQLRRLAAMHPDSSEATVTRTYLEWLSELPWRK 387

Query: 306 RSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSL 365
            S+ + D+R+A+ ILD DH+GL++VKDRILEYL+V+      KGPILC  GPPGVGKTSL
Sbjct: 388 LSRDRLDIRKAKVILDEDHFGLDKVKDRILEYLSVRKLNPDSKGPILCFAGPPGVGKTSL 447

Query: 366 GQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEI 425
           G+SIA+  GRK+ R++LGG+RDEAEIRGHRRTYIGSMPG++IQ + + G +NP+ +LDEI
Sbjct: 448 GRSIARTLGRKFQRISLGGMRDEAEIRGHRRTYIGSMPGRIIQSLKQCGTRNPVIMLDEI 507

Query: 426 DKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMN-IPAPLLDR 484
           DK+ +D RGDP+SALLEVLDPEQN +FSDHYL V +DLS VMF+ T+N ++ IPAPL DR
Sbjct: 508 DKIGADFRGDPSSALLEVLDPEQNWSFSDHYLNVPFDLSKVMFICTANQLDTIPAPLRDR 567

Query: 485 MEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGL 544
           ME+I + GYT  EK+ IA+RHL+P+Q   N L + E+T+ D+AI  ++R YTREAG+R L
Sbjct: 568 MEIISIPGYTMQEKVAIARRHLVPRQATSNGLGENEITIGDAAIETLVRGYTREAGLRNL 627

Query: 545 EREISKLCRKAVKQLLLDKSLKHIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLAWT 604
           EREI  +CRK  ++   + S     +        LG  RF     + E   G   GLAWT
Sbjct: 628 EREIGSVCRKLARR-KAEGSKGPFRVTPALTQKLLGAPRFLEDEHEKELLPGVALGLAWT 686

Query: 605 EVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDI 664
             GG++L +E + + GKGKL  TG LG+VM+ES QAA++  R+RAE+L I+P F E RD+
Sbjct: 687 PYGGEVLNVEVSPLKGKGKLILTGQLGDVMKESAQAAVSYARSRAEELDIDPGFAEDRDL 746

Query: 665 HVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLL 724
           H+HVP GATPKDGPSAG+ + TAL+S LTG PVR+D+ MTGEITLRG+VLP+GG+KEK+L
Sbjct: 747 HIHVPAGATPKDGPSAGVTLVTALISALTGRPVRSDLCMTGEITLRGRVLPVGGIKEKIL 806

Query: 725 AAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQ 772
           A    G+K V+IP +N +DLE++P +++  +++H    I++VL +A +
Sbjct: 807 AGVARGLKHVVIPAQNAKDLEDVPADLLRRIEVHLASHIDDVLPVAFK 854