Pairwise Alignments

Query, 139 a.a., transcription antitermination protein NusB (NCBI) from Escherichia coli BW25113

Subject, 161 a.a., transcription antitermination factor NusB from Pseudomonas stutzeri RCH2

 Score =  142 bits (358), Expect = 2e-39
 Identities = 72/134 (53%), Positives = 91/134 (67%)

Query: 2   KPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAY 61
           K A RR AR  A+QALY W ++   + ++E QF  + D   VD  YF ELL GVA + + 
Sbjct: 19  KIATRRVARSLAMQALYQWHMAGQSLNEIEAQFRVDNDFSGVDGSYFHELLTGVARSKSE 78

Query: 62  LDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHK 121
           +DG + P L R L+EL  VE A+LR++ YEL +R DVPY+V INE IELAK +GA D HK
Sbjct: 79  VDGAIAPNLDRPLDELDPVELAILRLSTYELMQRIDVPYRVVINEGIELAKVYGATDGHK 138

Query: 122 FVNGVLDKAAPVIR 135
           FVNGVLDK AP +R
Sbjct: 139 FVNGVLDKLAPTLR 152