Pairwise Alignments

Query, 139 a.a., transcription antitermination protein NusB (NCBI) from Escherichia coli BW25113

Subject, 134 a.a., transcription antitermination protein NusB (RefSeq) from Shewanella amazonensis SB2B

 Score =  182 bits (463), Expect = 1e-51
 Identities = 90/129 (69%), Positives = 106/129 (82%)

Query: 1   MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTA 60
           MKP+ RR+AR  AVQA+YSWQLS N++ADVE++FL EQ++  VDV YFREL AG AT TA
Sbjct: 1   MKPSERRKARRLAVQAIYSWQLSGNNVADVEHEFLTEQELDGVDVAYFRELFAGAATKTA 60

Query: 61  YLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSH 120
            LD  +KP L R LEE+  VEKA+LR+A+YEL+ R DVPYKV INEAIELAKSFGAED H
Sbjct: 61  QLDEKLKPLLDRPLEEVSPVEKAILRLAVYELTFRKDVPYKVVINEAIELAKSFGAEDGH 120

Query: 121 KFVNGVLDK 129
           KFVNG+LDK
Sbjct: 121 KFVNGILDK 129