Pairwise Alignments

Query, 139 a.a., transcription antitermination protein NusB (NCBI) from Escherichia coli BW25113

Subject, 134 a.a., transcription antitermination protein NusB (RefSeq) from Shewanella sp. ANA-3

 Score =  172 bits (437), Expect = 1e-48
 Identities = 85/129 (65%), Positives = 105/129 (81%)

Query: 1   MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTA 60
           MKP+ RR+AR  AVQA+YSWQLS N+IADVE++FL EQ +  VDV YFREL AGVAT   
Sbjct: 1   MKPSERRKARRLAVQAIYSWQLSGNNIADVEHEFLTEQSLDGVDVAYFRELFAGVATKKT 60

Query: 61  YLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSH 120
            LD L  P+L R ++E+  VEKA++R+A YEL+ R DVP+KVAINEAIELAK+FGA++SH
Sbjct: 61  QLDELFIPHLDRPIDEVSPVEKAIVRLAAYELTFRKDVPFKVAINEAIELAKAFGADESH 120

Query: 121 KFVNGVLDK 129
           KFVNG+LDK
Sbjct: 121 KFVNGLLDK 129