Pairwise Alignments

Query, 362 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 739 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  155 bits (392), Expect = 3e-42
 Identities = 96/269 (35%), Positives = 145/269 (53%), Gaps = 17/269 (6%)

Query: 99  INDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQ 158
           +ND+    +   ++I   LEN EF  + QP     TG +TG E LVRW  P   ++PP +
Sbjct: 462 MNDDVTRRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLE 521

Query: 159 FIPLAESSGLIVIMTRQLMKQTA-------DILMPVKHLLPDNFHIGINVSAGCFLAAGF 211
           FIP+AE +GL+V +  ++++          D L P++        I +N+SA  F     
Sbjct: 522 FIPVAEDTGLVVALGERVLRDACIQTRRWTDELGPLR--------IAVNISARQFQPDLL 573

Query: 212 EKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATY 271
           ++    L    G    +L LE+TE   +   P + AI + L    I+ A+DDFGTG+++ 
Sbjct: 574 DRVQAALAES-GLPPSQLELEITETTMMRDLPTSVAILERLAAQGISIAIDDFGTGHSSL 632

Query: 272 RYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMI 331
            YL+ FP+D IKID+SFV+    DE    IV  IV + R   L++VAEGVET +Q   + 
Sbjct: 633 YYLKNFPIDTIKIDRSFVRDVPGDEGDATIVSTIVTMGRNLSLNVVAEGVETDDQLGFLR 692

Query: 332 GKGVHFLQGYLYSPPVPGNKFISEWVMKA 360
             G   +QGY YS P+P + F ++W+  A
Sbjct: 693 AHGCREVQGYYYSKPLPADGF-ADWMRAA 720