Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 278 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 7/239 (2%)

Query: 42  HALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYF 101
           H +  GA ++     ++   RP +++L P+   HR      +   +VC  L  +  A   
Sbjct: 40  HLVRSGAVEVHYGRDKLQVERP-SLLLFPRPLTHRFVVAAGQQADMVCANLSFEGGASNP 98

Query: 102 LTSLPETLFLAPVNHSVEYNWLREAI-PFLQQESRSAMPGVDALCSQICATFFTLAVREW 160
           + S    +   P++      W  E +   L +E+     G  A+  ++        +R+ 
Sbjct: 99  IASGLADVVCLPLDEV----WGTEPVLTLLFEEAFEQRCGRVAMVERLLEVVMIQVLRQL 154

Query: 161 IAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGT 220
           +        +LS L HPRL   +  M E P   WT+E LAS+A MSR+ FA  FR+  GT
Sbjct: 155 MESDAVNGGLLSGLAHPRLRNALVAMHEAPAQDWTLEELASVAGMSRSVFATAFRETVGT 214

Query: 221 TPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERV 279
           TP   L   R+++ AQ   R   P+ +I+  VGY SE++F +AF    G +P +++ ++
Sbjct: 215 TPGQYLQGWRVRL-AQKALRRGRPLKMISAEVGYGSEAAFSRAFKAHSGLSPRDWKNQL 272