Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 328 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  110 bits (275), Expect = 4e-29
 Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 42/308 (13%)

Query: 2   DALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFTL 61
           D LS LL      G     C L + W +   A E +  R+H +  G   L +  G+   L
Sbjct: 15  DFLSELLRGLRLDGVDYVRCELTAPWGISFPAQEAA--RFHFIC-GDCWLRVADGDWIEL 71

Query: 62  RPGNVVLLPQNSAHRLSHVDNE---------------------------STCIVCGTLRL 94
           + G+ VLLP+  AH L+    E                           +T + CG+LR 
Sbjct: 72  KRGDAVLLPRGGAHALASAPGEKLSPLEAYSVEEVCHCVYDVCGGGRGKTTILFCGSLRF 131

Query: 95  QHSARY-FLTSLPETLFLAPVNHSVEYNWLREAIPFL----QQESRSAMPGVDALCSQIC 149
              A +  L  +P+ + +  +  S        AIP +     +E  ++  G   + +++ 
Sbjct: 132 NMDAMHPLLRMMPDVMRIDALTAS------EPAIPHMLDAMAREVGASRVGSGGVLARLA 185

Query: 150 ATFFTLAVREWIAQ-VNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRA 208
                L +R W+          ++ + HP LG VI  M   P   WTV+SLA +   SR+
Sbjct: 186 DVLAALIIRSWVEHGCGNTNGWVAAVRHPGLGRVIAAMHLDPEKTWTVDSLAKLMGASRS 245

Query: 209 SFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVREF 268
            FAQ F  V G TP   LT++R+  A Q  +R+ + + V+A  +GY SE+SF +AF R  
Sbjct: 246 GFAQQFAAVVGETPARYLTQVRMHQARQWLTRDRMRISVVARRLGYDSEASFSRAFKRVI 305

Query: 269 GCTPGEYR 276
           G  P  YR
Sbjct: 306 GLPPSHYR 313