Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 289 a.a., transcriptional Regulator, AraC family protein from Marinobacter adhaerens HP15

 Score = 89.4 bits (220), Expect = 9e-23
 Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 12/279 (4%)

Query: 1   MDALSRLL-MLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIF 59
           MD LS +L  LN   G   +  + G       G G +     H L  G   +     E  
Sbjct: 1   MDRLSYILDQLNVNAGVFFRGQLCGLASFEEEGTGYI-----HVLRSGVLDIMEANREKL 55

Query: 60  TLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARY-FLTSLPETLFLAPVNHSV 118
           TL    ++   ++  H+L   + E   ++C +++ Q  +R   L +LP+++ L P++   
Sbjct: 56  TLSEPTMIFSVRSQPHQLFGANREGAEMICASIKFQTGSRNPVLDALPDSVVL-PLS--- 111

Query: 119 EYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPR 178
               L   +  L  E+ +A  G DA+ +++    F   +R  ++   T K +LS L   +
Sbjct: 112 SVQGLGSFVDVLFAEAEAAQEGRDAVMNRLVEVIFVNVLRHVVSDGETPKGLLSALADRQ 171

Query: 179 LGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMF 238
           L  V+  +        +V+ LA +A MSR++F Q F+++ G  P   +   R+  A ++ 
Sbjct: 172 LSKVLSCIDSNLNGDLSVDRLAEVATMSRSTFIQHFKNILGLAPGEYVQNTRIAAAKKLI 231

Query: 239 SRETLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRE 277
            ++  P+ +I   VGY   S F +AF +  G TP E+++
Sbjct: 232 LKDK-PMSIICFEVGYEDASGFSRAFKKNTGMTPREWKK 269