Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 356 a.a., transcriptional regulator, AraC family from Paraburkholderia bryophila 376MFSha3.1

 Score =  111 bits (277), Expect = 3e-29
 Identities = 60/161 (37%), Positives = 90/161 (55%)

Query: 123 LREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLGAV 182
           L+  I  ++ E+    PG  A+ + +    F +A+R    Q ++   +LSLL  PRL A 
Sbjct: 191 LQTVIGLMRDEAGQRRPGALAIVTALSQALFGMALRVHGEQADSTPGMLSLLADPRLSAS 250

Query: 183 IQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRET 242
           +Q ML  P  AWT+  L  +A MSRA++A+ F + +G T +  LT++R+ IA  +  R  
Sbjct: 251 VQGMLSAPQRAWTIAELGELAAMSRATYARRFNERAGMTVMDFLTQIRMTIACDLLRRTQ 310

Query: 243 LPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLA 283
                I E+VGY SE++F KAF +  G TPG YR   +Q A
Sbjct: 311 RSAAEIGEAVGYQSEAAFGKAFQQSVGVTPGRYRRHPQQSA 351



 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 28/81 (34%), Positives = 45/81 (55%)

Query: 1  MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT 60
          MD LSRLL L  PQ ++D  C+L   + + H   E  +  +H +  G+  +EM  G    
Sbjct: 1  MDTLSRLLDLARPQASLDLRCLLTGAFDVDHAPMEPGIAPFHLVLAGSCVIEMADGAQVR 60

Query: 61 LRPGNVVLLPQNSAHRLSHVD 81
          L+ G+ +L P+ +AHR+  V+
Sbjct: 61 LQTGDFMLFPRGAAHRVRDVE 81