Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 320 a.a., AraC family transcriptional regulator, activator of mtrCDE from Paraburkholderia bryophila 376MFSha3.1

 Score =  111 bits (277), Expect = 2e-29
 Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 30/306 (9%)

Query: 1   MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMP-TGEIF 59
           +D LSRLL +   +G ++  C  G+ WQ+ +       + +H +  G+A LE P  G+  
Sbjct: 5   LDWLSRLLGMMTVRGQLELRCSYGAPWQVIYDDSAAGEMPYHIVLGGSAILETPGEGKPQ 64

Query: 60  TLRPGNVVLLPQNSAH-------------------RLSHVDNESTC----IVCGTLRLQH 96
            L  G++V+L   SAH                    L+  +N+ +     ++CG + L  
Sbjct: 65  DLGAGDIVMLTHGSAHILHDGSGARPKPARQRQTLNLTVSENKGSGQRLEMLCGRIVLAP 124

Query: 97  SA-RYFLTSLPETLFL----APVNHSVE-YNWLREAIPFLQQESRSAMPGVDALCSQICA 150
              R     LP  L +    A  + S E    L+  +  LQ ES +   G  A+ + +  
Sbjct: 125 PHDRLIRAYLPPRLVVRTSAAGASSSAETLAQLKGLMALLQAESSADRLGGYAMLNALST 184

Query: 151 TFFTLAVREWIAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASF 210
             F LA+R           +L+L  HPRL   +  +   P + WT+  L+ +  MSRA+ 
Sbjct: 185 ALFALALRMSGESDEAPTGLLALAGHPRLAPALAAIFNDPAYPWTLSELSELCSMSRATL 244

Query: 211 AQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVREFGC 270
            + F+D  G +P  +LT +R+ +AA    +  +   V+AE+VGY S ++F +AF +  G 
Sbjct: 245 LRHFQDKVGRSPNELLTDVRMALAANELKKPGVSTEVVAETVGYQSVAAFRRAFTQHLGM 304

Query: 271 TPGEYR 276
           TP ++R
Sbjct: 305 TPADWR 310