Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 318 a.a., transcriptional regulator, AraC family from Paraburkholderia bryophila 376MFSha3.1

 Score =  118 bits (296), Expect = 1e-31
 Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 34/313 (10%)

Query: 1   MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMP-TGEIF 59
           +D LS LL +    G ++  C  G+ W++         + +H + +G A +E P T    
Sbjct: 4   VDWLSHLLQMITITGRLEVRCAYGAPWRVAWPRSSAHEVPYHVVLKGRAIIEDPETDTAR 63

Query: 60  TLRPGNVVLLPQNSAHRLSHVDNES---TC---------------------IVCGTLRL- 94
            L  G+VVLLP  SAH L      +   TC                     ++CG   + 
Sbjct: 64  ALVAGDVVLLPHGSAHVLHDGSGHAPGPTCERRDSAGLTFSENDGQGERLDMLCGRFLIG 123

Query: 95  -QHSARYFLTSLPETLFLAPVNHSVEY------NWLREAIPFLQQESRSAMPGVDALCSQ 147
             H  R     LP  + +  +    E       N L   +  +++ES     G  A+ + 
Sbjct: 124 PPHD-RLIRNYLPTNVVVRTMKGRGEKDAGTAPNHLASFVGMMREESTGDKVGGYAIVNA 182

Query: 148 ICATFFTLAVREWIAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSR 207
           + +  FTL +RE          +L+L  +PRL   I  M   P   W +  LA +  MSR
Sbjct: 183 LSSALFTLVLREASESEEAPAGLLALAGNPRLAPAISAMFADPARPWNLPELADLCSMSR 242

Query: 208 ASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVRE 267
           A+F + F+D  G + + +LT +R+ +AA    +  +    +AESVGY S SSF + F   
Sbjct: 243 ATFMRHFQDTLGCSAVDLLTDIRMSLAANELKKPMMTTEAVAESVGYQSVSSFRRVFTER 302

Query: 268 FGCTPGEYRERVR 280
            G TPG++R   R
Sbjct: 303 IGMTPGQWRRLAR 315