Pairwise Alignments

Query, 208 a.a., CP4-6 prophage; conserved protein (NCBI) from Escherichia coli BW25113

Subject, 221 a.a., transposase (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (327), Expect = 2e-35
 Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 5/193 (2%)

Query: 14  EYQSKINKLLCYLTNRYPRLIAVRVDLHYPKIVDNGDNICCFPNLEPGVISRMRESLRAK 73
           +Y   I + +    + +PR + VR DLH P +  N D+   F   +  VIS+  +SL AK
Sbjct: 32  QYLDAILRTMHAALDEHPRTLMVRFDLHLPLL--NFDDSPRF--YDSTVISKFFKSLNAK 87

Query: 74  LEADRTRKVREDKRIYRCPLFIIWAKEYSESGKCHYHICLLFNKDAYYHLGDYDQ-DDNL 132
           ++ DR  K+RE KR + C L  +W KE  E+   HYH+ +  N DAY HLG Y    +NL
Sbjct: 88  IQHDRAVKLREGKRTHPCTLRYVWVKECREAATDHYHVAIFLNNDAYCHLGSYSNGGNNL 147

Query: 133 RGMITGAWYSALRLERDDHPGLVHFPENCKYVLDTNSTDFQQNYQALLTRLDYLTKVESK 192
           R  I  AW SA+ ++       VH P    Y ++ NS  F  ++     RL YL K+E+K
Sbjct: 148 RARIVEAWASAIGVDEFVAEDKVHCPSKPLYYINRNSVGFTTSFAKAFERLSYLAKLETK 207

Query: 193 VFGEGDRNFGCSQ 205
            +G+  R+FGCSQ
Sbjct: 208 HYGDNTRSFGCSQ 220