Pairwise Alignments

Query, 384 a.a., CP4-6 prophage; predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 390 a.a., transposase from Sinorhizobium meliloti 1021

 Score =  160 bits (404), Expect = 7e-44
 Identities = 113/353 (32%), Positives = 168/353 (47%), Gaps = 20/353 (5%)

Query: 16  RTEFVLFASQDGANIRSLCRRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPNRSSD 75
           +T  +  A      I  LCR FGIS  TG+K + R+   G  GL DR R P+   N+   
Sbjct: 6   QTSQIRCAGSGWREIAVLCREFGISRKTGHKIISRYNACGLEGLTDRSRRPYRHANQLPF 65

Query: 76  DITALLRMAHDRHERWGARKIKRWLED--QGHTMPAFSTVHNLMARHGLLP------GAS 127
            I  L+  A      WGA KI+  L         PA STVH ++ R+GL+         +
Sbjct: 66  QIEKLIVRAKQEKPNWGAPKIRERLARLYPDVQTPAISTVHAVLDRNGLVEHRKRRRNRA 125

Query: 128 PGIPATGRFEHDAPNRLWQMDFKGHFPFGGGR-CHPLTLLDDHSRFSLCLAHCTDERRET 186
            G P +   +    N LW  D+KG F     R C+PLT+ D  SR+ L        +   
Sbjct: 126 QGTPLS---QPCRANDLWCADYKGEFMLADKRYCYPLTITDFASRYLLACEALHTTKEVY 182

Query: 187 VQQQLVSVFERYGLPDRMTMDNGSPWGDTTGTW--TALELWLMRLGIRVGHSRPYHPQTQ 244
                  VF+ +GLP  +  DNG P+      +  + L +W +RLGI +   +P +PQ  
Sbjct: 183 AFTVFERVFKEFGLPRAIRTDNGVPFASPNALFNLSRLSVWWLRLGIDIERIKPGNPQQN 242

Query: 245 GKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSAR 304
           G+ ER H +LK E  +    A+  + Q  FD +   +N+ERPH AL+MA P   Y  S R
Sbjct: 243 GRHERMHLTLKLETTKPAG-ANFLQQQARFDDFVEEFNIERPHRALNMACPAECYSVSPR 301

Query: 305 QYSG--NTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFRGERVGLKEMQE 355
            Y G  +   P +D+ V    V   G++  K   ++  + F G+ VG+K++++
Sbjct: 302 PYRGLPSLDYPFHDQAV---TVTTCGRICYKRKKINLSQVFAGQTVGIKQVED 351