Pairwise Alignments

Query, 384 a.a., CP4-6 prophage; predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 274 a.a., ISD1, transposase OrfB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 65/234 (27%), Positives = 95/234 (40%), Gaps = 18/234 (7%)

Query: 70  PNRSSDDITALLRMAHDRHERWGARKIKRWLEDQG------HTMPAFSTVHNLMARHGL- 122
           P   S  I ALL +A DR+ R+G  K+   L   G           +  +   + R G  
Sbjct: 33  PRDDSPIIEALLGLA-DRYPRYGFGKLFAVLRRHGFRWNHKRVYRVYCLLKMNLRRKGKK 91

Query: 123 -LPGASPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRCHPLTLLDDHSRFSLCLAHCTD 181
            LP  +P   A         N  W +DF       G R     +LDD SR  L +   T+
Sbjct: 92  RLPSRNPQPLAVP----PCANVCWSIDFMHDALASGQRFRTFNVLDDFSRECLAIEVDTN 147

Query: 182 ERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTTGTWTALELWLMRLGIRVGHSRPYHP 241
                V + L  +    GLP ++ MDNG            L  W  + G+ +   +P  P
Sbjct: 148 LPAARVLRVLDRIVAWRGLPAKLRMDNGPELISVL-----LADWAEKNGVALEFIQPGKP 202

Query: 242 QTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVP 295
                +ERF+++ + EVL    F    E++   ++W   YN ERPHE+L    P
Sbjct: 203 TQNSYIERFNKTYREEVLDFYLFKSLTEVKEITENWLRQYNEERPHESLGDLTP 256