Pairwise Alignments

Query, 452 a.a., predicted membrane-bound lytic murein transglycosylase D (NCBI) from Escherichia coli BW25113

Subject, 398 a.a., Slt family transglycosylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  176 bits (447), Expect = 9e-49
 Identities = 114/386 (29%), Positives = 185/386 (47%), Gaps = 19/386 (4%)

Query: 6   ILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGD------L 59
           +LL   +L GCQ   +         A  Q E      +        ++ P+ +      L
Sbjct: 24  LLLTLTILAGCQVNTDTSGEPWETDAQPQPEQVPLVVKEATAPSEPAL-PEAEAKAYQNL 82

Query: 60  WAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELV 119
           W  I D   + +P +  +         N  +  +    AEP++Y I  +++ R+MP+EL 
Sbjct: 83  WQKIADAQTIAVPSHSEVTYFLGLNRNNGLFPINAPAAAEPWLYDIISELEARDMPLELA 142

Query: 120 LLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQR 179
           LLP++ES + P    G   AG+WQ+   TGRN+ L+  +++D R D + +T AAL+ +  
Sbjct: 143 LLPLIESGYHP-GVKGLGGAGLWQLSAQTGRNHHLRVNQSFDGRLDPIPATRAALDYLLY 201

Query: 180 LNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSD 239
           L +MF+ DWL  VAAYN GEG++  AI+ N+ +GK+ DF +L L +     + K LA   
Sbjct: 202 LYEMFNNDWLSAVAAYNMGEGKLKTAIERNRRKGKAEDFLALGLSRNQAPTLYKWLAALA 261

Query: 240 ILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGA 299
           +L++ +      P    +  LAR  + + V ++ +A   G+S  +L   N   +   +  
Sbjct: 262 VLRDPQTQSASFPPIANAPVLAREAVPNGVALSNIAQAMGMSAKELSRLNPAFRDGIVPF 321

Query: 300 SGPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLG 359
           SG   + +P+     L  +L +          +  +TP     Y V+SGDTLS IA R G
Sbjct: 322 SGKYQINLPESRLPALNAALVN----------LRPSTPGKGGSYQVKSGDTLSGIAKRHG 371

Query: 360 VSTKDLQQWNKLR-GSKLKPGQSLTI 384
           +    L   N L   S +KPGQ L +
Sbjct: 372 MRLDKLLSLNGLNMKSIIKPGQQLRL 397



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 14/121 (11%)

Query: 335 NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKP-----------GQSLT 383
           N P+ +R   V +G  LS+IA  +G+S K+L + N      + P            +   
Sbjct: 278 NAPVLARE-AVPNGVALSNIAQAMGMSAKELSRLNPAFRDGIVPFSGKYQINLPESRLPA 336

Query: 384 IGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWN--SDTANLQPGDKLT 441
           + A     R +      +Y+V+ GD+LS IAKRHG+ +  ++  N  +  + ++PG +L 
Sbjct: 337 LNAALVNLRPSTPGKGGSYQVKSGDTLSGIAKRHGMRLDKLLSLNGLNMKSIIKPGQQLR 396

Query: 442 L 442
           L
Sbjct: 397 L 397