Pairwise Alignments

Query, 452 a.a., predicted membrane-bound lytic murein transglycosylase D (NCBI) from Escherichia coli BW25113

Subject, 515 a.a., MltD domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  265 bits (678), Expect = 2e-75
 Identities = 168/509 (33%), Positives = 264/509 (51%), Gaps = 80/509 (15%)

Query: 12  LLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDG----DLWAFIGDEL 67
           LL GCQ+  N Q          + EA   T++        +  P+     D+W  I   +
Sbjct: 14  LLTGCQTLDNHQ--------VTKPEAETVTTENTVPQYYLATEPESAQITDVWERIRQGM 65

Query: 68  KMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVLLPIVESA 127
           ++ +P+   +   +  Y++N  +L  ++ RA PYMY I  +++KR++P+E+ LLPI+ESA
Sbjct: 66  QLPVPDKKLVNYYRDWYIKNPKHLEVISERAAPYMYLIVEELEKRHLPIEIALLPIIESA 125

Query: 128 FDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRLNKMFDGD 187
           FDP A+S + A+G+WQ       ++GL+    YD RRDV AST AAL+M++ L    + +
Sbjct: 126 FDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTVAALDMLEYLYDKTNNN 185

Query: 188 WLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDILKNSKRY 247
           WL  +AAYNSGE RV+ AIK N+ +G  TDFWSL LP+ET++YVP++LAL++++K++  Y
Sbjct: 186 WLYAIAAYNSGESRVLNAIKRNEDKGLKTDFWSLDLPKETERYVPQLLALAEVIKHADEY 245

Query: 248 GVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGASGPQYVMV 307
           G+ L   D S ++  V + S +++A  A +A ++  +L   N G        +GP  +++
Sbjct: 246 GITLAPIDNSPSIEVVDIDSQIDLAMAAGLANMTTHELLKLNPGYNRWATAPTGPHTLVL 305

Query: 308 PKKHADQ----------------LRESLASGE----IAAVQSTLV--------------- 332
           P   +++                LR ++ SG+    IA    T V               
Sbjct: 306 PIDKSEEFKKALAETESEARVSWLRYTIKSGDSIGAIAKKHHTTVNAIRAANGMKNNNIV 365

Query: 333 -----------------------------ADNTPLNSRVYTVRSGDTLSSIASRLGVSTK 363
                                        A +T  N   Y V+SGDTL  IA    VS K
Sbjct: 366 AGRHLIIPVSADDKQLYAMSTSQKLPKKAATSTSGNKLTYQVKSGDTLWQIAQNHKVSVK 425

Query: 364 DLQQWNKL-RGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIK 422
            L  WN L + SKL+ GQ LTI A  + Q  A    +++Y+V+ GDSL+ IA +  V + 
Sbjct: 426 QLTAWNHLNKDSKLQMGQKLTIVAPPT-QAEAEQIRTVSYKVKSGDSLARIASKFKVTVA 484

Query: 423 DVMRWNSDTAN--LQPGDKLTLFVKNNNM 449
           +++ WNS T++  +QPG  L L V  +N+
Sbjct: 485 ELLEWNSLTSSQYIQPGQVLKLVVDESNL 513