Pairwise Alignments

Query, 473 a.a., chloride channel protein (NCBI) from Escherichia coli BW25113

Subject, 563 a.a., putative voltage-gated CIC-type chloride channel from Phaeobacter inhibens DSM 17395

 Score =  129 bits (324), Expect = 3e-34
 Identities = 115/436 (26%), Positives = 199/436 (45%), Gaps = 35/436 (8%)

Query: 19  RQLIRQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGV----AWLQNQRMGALVHT-AD 73
           R + R L  R  + +   F+A ++G   G AA+ F KG+    AW+        +H+ A 
Sbjct: 21  RDVWRVLRHRGPSQIQFWFIALLIGIAAGFAALFFRKGITAFQAWVYGTEDVNFLHSFAQ 80

Query: 74  NYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPE-IEGA-LEDQRPVRWWRVLPVK 131
             P    VA     V  +    ++ ++ P+A    + + IEGA L D R         V+
Sbjct: 81  GMPWYWLVAI--PTVGGLLVGVILHRFTPDARVRSVADVIEGAALGDGR---------VE 129

Query: 132 FFGGLG-------TLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAA 184
              GL        TL  G   GREGP V + G I   V +  +  G   R  LL    AA
Sbjct: 130 MRAGLASACASFITLSTGGSTGREGPVVHMAGVISTWVSNRIQADGITGRD-LLGCAVAA 188

Query: 185 GLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALIDVGKL 244
            ++A+FNAP+AG LF +E +   F   + +   + I  +  T++ R+   +V   D+  +
Sbjct: 189 AVSASFNAPIAGALFALEVVLRHF--AVHAFAPIVIASVAGTVINRLEYGDVTEFDL--I 244

Query: 245 SDAPLN---TLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGG-NITKWVLMGGAIGG 300
           +   L     L  +L+LG+I G+   +  + +   + + + +     + +W L   A G 
Sbjct: 245 TPGALQFYVELPAFLMLGLICGLVAVVLMRSIFFAEQIGNALQDRLQLPRW-LRPAASGL 303

Query: 301 LCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPM 360
           L G++    P   G G+    +A  G   +   +   + +     +       GG+F+P 
Sbjct: 304 LLGVIAVWFPHIIGVGYETTVLALTGALVLHQTILFAMVKTAAVAITMGGRMGGGVFSPS 363

Query: 361 LALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQ 420
           L +G + G AFG++A  + P        +A AGMGA+ AA + AP++  ++V E+T ++Q
Sbjct: 364 LMVGALTGLAFGLIATAVLPDVSGTHTLYAFAGMGAVAAAVLGAPISTTLIVFELTGDWQ 423

Query: 421 LILPMIITGLGATLLA 436
           + L +++    +T LA
Sbjct: 424 IGLAVMVAVSMSTALA 439