Pairwise Alignments

Query, 473 a.a., chloride channel protein (NCBI) from Escherichia coli BW25113

Subject, 603 a.a., chloride channel family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  130 bits (327), Expect = 1e-34
 Identities = 95/312 (30%), Positives = 143/312 (45%), Gaps = 15/312 (4%)

Query: 130 VKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAA 189
           +K    + T+  G   GREGP  QIG  +G  V D   L   E R  +LA GAA GL A 
Sbjct: 136 IKGLTSILTIASGGSAGREGPISQIGAGLGSFVADRLHLSTKERRLLMLA-GAAGGLGAV 194

Query: 190 FNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALIDVGKLSDAPL 249
           F APL G L  IE +  +       + A+   V+  T+   +F  E  +  + + S + +
Sbjct: 195 FRAPLGGALTAIEVVYREDFEAEAMLPAILSSVVAYTLFAYVFGTE-PMFAIPRFSFSDM 253

Query: 250 NTLWLYLILGIIFGIFGPIFNKWVLGMQ-----DLLHRVHGGNITKWVLMGGAIGGLC-G 303
             L  YL L +     G  + +    M+      L  RV        ++   A+GGL  G
Sbjct: 254 RELPFYLTLALACAFTGWAYVRTFRFMKYGVFLRLAERVG-------IMWTTALGGLLVG 306

Query: 304 LLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLAL 363
           L G +       G+  +  A  G+ ++  +V I VA+ + T +   SG  GG+FAP L +
Sbjct: 307 LFGIIYTPMLSDGYGWVEQAILGHLTVTTMVTIMVAKTLATAMTLGSGMSGGMFAPALFV 366

Query: 364 GTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLIL 423
           G + G   G  A +LFP    E G + + GM A  A    AP+  +I+V E+T  Y L+ 
Sbjct: 367 GGMTGGVVGYAAHDLFPHIVREPGGYVLVGMAAFFAGVAHAPVGPLIMVCELTQGYGLLA 426

Query: 424 PMIITGLGATLL 435
           P+++      LL
Sbjct: 427 PLMLASAVCILL 438



 Score = 35.8 bits (81), Expect = 4e-06
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 342 ITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAAS 401
           +T++L  +SG   G   P+  +G  LG+           +  L     A  G+GA+  A 
Sbjct: 139 LTSILTIASGGSAGREGPISQIGAGLGSFVADRLHLSTKERRLLMLAGAAGGLGAVFRAP 198

Query: 402 IRAPLTGIILVLEMTDNYQLILPMIITGLGA-TLLAQFTGGKPLYS 446
           +   LT I +V       + +LP I++ + A TL A   G +P+++
Sbjct: 199 LGGALTAIEVVYREDFEAEAMLPAILSSVVAYTLFAYVFGTEPMFA 244