Pairwise Alignments

Query, 308 a.a., glutamyl-Q tRNA(Asp) synthetase (RefSeq) from Escherichia coli BW25113

Subject, 299 a.a., glutamyl-tRNA synthetase domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  300 bits (767), Expect = 4e-86
 Identities = 156/280 (55%), Positives = 192/280 (68%), Gaps = 3/280 (1%)

Query: 16  YIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETILRQLE 75
           Y+GRFAPSPSG LHFGSL+AALGSYL+AR+  G+WL+RIEDIDPPREV GAA+ ILR LE
Sbjct: 15  YVGRFAPSPSGALHFGSLVAALGSYLRARSLGGKWLIRIEDIDPPREVKGAADDILRTLE 74

Query: 76  HYGLHWDGDVLWQSQRHDAYREALAWLHEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHG 135
            YG  WD  VL+QS R DAY+  L  L  Q  +Y+C C+R +IQ++GGIYDG C  L   
Sbjct: 75  AYGFEWDDTVLYQSARTDAYQAKLDQLLAQDDAYFCQCSRKQIQAMGGIYDGRCHQLATP 134

Query: 136 PDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGV 195
             + A+R+  +  V +FTD L G +  D   A EDFII R DGL+AY LAVV+DD  QG+
Sbjct: 135 HQSGAIRLVNRAQVAEFTDNLMGKVVVDHDFATEDFIIKRSDGLYAYQLAVVLDDAHQGI 194

Query: 196 TEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRP 255
           +E+VRG DLIE + RQ+SLYQ  G   P ++HLPLA    G KLSKQNHA A+ K  P+ 
Sbjct: 195 SEVVRGCDLIEASCRQLSLYQSLGLTAPQWLHLPLACLTPGFKLSKQNHAQAIDKQHPQA 254

Query: 256 VLIAALQFLGQQAEAHWQDFSVEQILQSAVKNWRLTAVPE 295
            L AAL FLGQ      +  S  Q+L  AV  + LTAVP+
Sbjct: 255 SLNAALTFLGQSTV---EPTSAAQMLAQAVAQFELTAVPK 291