Pairwise Alignments

Query, 617 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 458 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  167 bits (424), Expect = 7e-46
 Identities = 133/511 (26%), Positives = 215/511 (42%), Gaps = 101/511 (19%)

Query: 58  TVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTYPTNVAQAVQWSHDNP 117
           T S      AV +  FS A++ Q +AP+ALYPD+LL+ +L+ASTYP  V QA +W + N 
Sbjct: 21  TPSVSRAEDAVQEIQFSDAELAQMLAPIALYPDSLLTHILIASTYPLEVVQANRWRNKNK 80

Query: 118 LKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQR 177
             +G  A+     + WD SV +LVAFP L+  + ++ +W Q LGD FL   + V+DS+Q 
Sbjct: 81  SLEGAEAVNRAEKKDWDPSVTALVAFPDLLQRLSDDLEWTQKLGDTFLQDEERVLDSIQS 140

Query: 178 LRQLAQQTGSLKSSTEQKVITTTKKAVPVKQTVTAPVIPSNTVLTANPVITEPATTVISI 237
           LRQ A++  +       KV    ++ V                                I
Sbjct: 141 LRQQAERANAFDDMENMKVTKVNRQIV--------------------------------I 168

Query: 238 EPANPDVVYIPNYNPTVVYGNWANTAYPPVYLP-PPAGEPFVDSFVRG-FGYSMGVATTY 295
           EP   +V+Y+P Y+  VVYG+W    YPPVY   PP    +    + G F ++ G+  ++
Sbjct: 169 EPVQREVIYVPYYDTRVVYGHWHWYNYPPVYWAYPPHYARYYPGHISGHFYFNSGIHISF 228

Query: 296 -ALFSSIDWDDDDHDHHHHDNDDYHHHDGGHRDGNGWQHNGDNINIDVNNFNRITGEHLT 354
              FS+  W         H    +HHH   +R                  ++RI     +
Sbjct: 229 NYFFSAFSW------RQRHIVVTHHHHTTRYRP-----------------YSRIV---TS 262

Query: 355 DKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAANQFQQR 414
                W H P +R+GV Y    +  R+ +   N             D +  ++  ++   
Sbjct: 263 SGAQRWHHKPVHRHGVAYRSPKVKARYDKYRPN-----------RYDVKHNSSMERYSNS 311

Query: 415 THAAPVITRDTQRQAAAQRFNEAEHYGSYDDFHDFSRRQPLTQQQKDAARQ--RYQSA-- 470
             A P               ++A+HY +        R Q  + +  DA  Q  R+Q+A  
Sbjct: 312 KQAKP---------------SQAKHYNAAQ--VQKRREQNFSHKLSDARSQHDRHQNAQK 354

Query: 471 SPEQRQAVRERMQTNPKIQQRREAARERIQSASPEQRQAVREKMQTNPQNQQRRDAARER 530
           +P +    R+R+  N K      A R     A    ++  REK      + QR   + +R
Sbjct: 355 TPTKYYEKRDRLSLNDK------ANRSSSNKADNRTKEWNREKSPQRNDSYQREMKSHQR 408

Query: 531 IQSASPEQRQVFKEKVQQRPLNQQQRDNARQ 561
              +   Q+Q ++ +   +P+   QR+ + Q
Sbjct: 409 DNKS--HQQQSYQRERSHQPVKSPQRERSHQ 437