Pairwise Alignments

Query, 617 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 540 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score =  194 bits (492), Expect = 1e-53
 Identities = 158/562 (28%), Positives = 235/562 (41%), Gaps = 76/562 (13%)

Query: 50  AAAVTFPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTYPTNVAQA 109
           A A T P   + PP TP   +      Q+ Q VAP+AL+PD L++QVL  +TYP  V  A
Sbjct: 22  AGAPTAPTAAATPPYTPPTAE------QLSQMVAPIALFPDKLVAQVLAGATYPDQVVAA 75

Query: 110 VQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQ 169
            QW   N   +GD    A   QPWD SVKSL  FP +++ M  NP W + LGDAF+  P 
Sbjct: 76  NQWLGQNSALKGDILQAAEDKQPWDVSVKSLTMFPAVLSQMAANPDWTRALGDAFVNDPN 135

Query: 170 DVMDSVQRLRQLAQQTGSLKSSTEQKVITTTKKAVPVKQTVTAPVIPSNTVLTANPVITE 229
           DVM+++Q LR  AQQ G LKSS + +V TT +    V+     P      V    PVI  
Sbjct: 136 DVMNAIQALRLKAQQAGHLKSSPQLRVSTTERSTSTVRYETPQP------VYAGAPVIAP 189

Query: 230 PATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEPFVDSFVRGFGYSM 289
           P  T++ IE + PD VY+P Y+P VVYG  A     P Y+  P      +  V    + +
Sbjct: 190 PPQTIV-IESSQPDTVYVPRYDPAVVYG--APVPVYPGYVYRPPSHVADEVVVGALSFGV 246

Query: 290 GVATTYALFSSIDWDDDDHDHHH------------HDNDDYHHH--------------DG 323
           GV    A+    DW   D   H             + N  Y  H              + 
Sbjct: 247 GVFVGEAISHHSDWGWHDWGMHWGGPVQQDQPAVVYKNTSYVSHSTTVINRVTNNVIVNN 306

Query: 324 GHRDGNGWQ--HNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRF 381
            +R  N     +N  N+N +VNN   +  E+  D+ +   +    R  V      M+   
Sbjct: 307 NNRTVNNISNVNNVSNVN-NVNNTRNVVNENRVDRRVTVNNVDQRREAVQAAPAAMSMP- 364

Query: 382 HQTDVNGGMSAT-QLPAPTRDSQRQAAANQFQQRTHAAPVITRDTQRQAAAQRFNEAEHY 440
           H T  +  M AT   PAP    Q+ AA ++     H AP        Q  A+   E +  
Sbjct: 365 HFTASDARMGATPHAPAP----QQMAALHE-----HVAPAAPEHASAQHDARVMAEEKKM 415

Query: 441 GSYDDFHDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPKIQQRREAARERIQ 500
                  +  +  P+ Q QK+AA+        ++  A      T P            + 
Sbjct: 416 A------EERKMPPMQQMQKEAAKPAMTRMENKEAPAAH---MTPP------------VA 454

Query: 501 SASPEQRQAVREKMQTNPQNQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNAR 560
            A P  ++  +  M T+  + Q+ +A         P Q      +V++    Q Q +   
Sbjct: 455 HAQPAPQREEKMSMPTHAASMQQHEAQAHAPAPHPPAQHAAEAHEVEKHEAQQHQAEKHE 514

Query: 561 QRVQSASPEQRQVFREKVQESR 582
           ++  +A   + +    + +E++
Sbjct: 515 EQKHAADKHEAEKHEGEKREAQ 536