Pairwise Alignments

Query, 284 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 278 a.a., ampE protein from Pseudomonas syringae pv. syringae B728a

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 20/246 (8%)

Query: 1   MTLFTTLLVLIFERLFKLGEHWQLDH-------RLEAFFRRVKHFSLGRTLGMTIIAMGV 53
           M+    LL ++ E+   L +  Q D        +LEA  R      +   L + ++ + +
Sbjct: 1   MSFLVLLLAVLIEKFSALRQRVQRDGPWLKELAKLEASPRTSTRPWVMLAL-LVLVPVLI 59

Query: 54  TFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGEL 113
             L L  +  V +    L + LL+ +  +G   +      +  A  R D+ A   +A E 
Sbjct: 60  LQLALTIIGSVAYGWLVLPIHLLVLIYSLGRVDLIAVLGPFRDACRRGDAQAAVHVA-ER 118

Query: 114 TMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQY 173
            M  GV A   E + L+ +Q  LLW  F+ + A +FW  V    GPV  + Y  L     
Sbjct: 119 DM--GVQADNSE-QLLQGVQGYLLWQAFQSFFAVIFWYFV---LGPVAALAYRLLA---- 168

Query: 174 WLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQY 233
            LA        L      + H  DWVPVRL    +AL+G+           L +++ S  
Sbjct: 169 -LAVEHGKTPALVERAGQLRHAFDWVPVRLLAASFALVGNFVAVTRVMLHELLNWNISAA 227

Query: 234 QVLTRL 239
           Q++TR+
Sbjct: 228 QLITRV 233