Pairwise Alignments

Query, 183 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) from Escherichia coli BW25113

Subject, 181 a.a., AmpD protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  216 bits (549), Expect = 2e-61
 Identities = 110/175 (62%), Positives = 128/175 (73%), Gaps = 2/175 (1%)

Query: 1   MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60
           M  E GW   ARR  SPH++ RP  E  +LLV+HNISLP G FG P+ID LF G +D  A
Sbjct: 1   MSFEFGWFTAARRCESPHFNQRPFGEI-SLLVIHNISLPAGCFGLPYIDQLFQGCLDTNA 59

Query: 61  HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120
              FA++A L+VSAH LIRRDGE VQYV  D RAWHAGVS+Y  RE CNDFSIGIELEGT
Sbjct: 60  DNSFADLAGLKVSAHFLIRRDGECVQYVSCDDRAWHAGVSRYGERENCNDFSIGIELEGT 119

Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDI-AKNMTGHCDIAPDRKTDPGPAFDWARF 174
           DT  YT AQYQQL  +T+AL+  Y  + A+ + GHCDIAP RKTDPGP+FDW R+
Sbjct: 120 DTEPYTAAQYQQLVELTQALLAQYSSLSAERIVGHCDIAPVRKTDPGPSFDWERY 174