Pairwise Alignments

Query, 363 a.a., 3-isopropylmalate dehydrogenase (VIMSS) from Escherichia coli BW25113

Subject, 368 a.a., 3-isopropylmalate dehydrogenase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  330 bits (845), Expect = 5e-95
 Identities = 184/357 (51%), Positives = 233/357 (65%), Gaps = 10/357 (2%)

Query: 7   IAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCE 66
           + +L GDGIGPEVM +  K++D    +  +    S   VGGAA D HG PL   T+   +
Sbjct: 6   LLILAGDGIGPEVMAEVRKIIDWYGAKRDLAFDVSEDLVGGAAYDVHGVPLADETMAKAQ 65

Query: 67  QADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRAD 126
             DAVL G+VGGPK++ L    +PERG LL LRK   LF+NLRPA+ +  L  F  L+ D
Sbjct: 66  AVDAVLLGAVGGPKYDTLDFSLKPERG-LLRLRKEMDLFANLRPAQCFDALADFSSLKKD 124

Query: 127 IAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAFESARKR 186
           I A G DI+ VRELT G+YFG+P+G    G      +T+ Y   EI R+AR AFE A+KR
Sbjct: 125 IVA-GLDIMIVRELTSGVYFGEPRGIHKEGNERVGINTQRYTESEIARVARSAFELAKKR 183

Query: 187 RHKVTSIDKANVLQSSILWREIVNEI-ATEYPDVELAHMYIDNATMQLIKDPSQFDVLLC 245
            +KV S++KANV++S ILWR++V EI A EY DVEL+HMY D   MQL++ P QFDV++ 
Sbjct: 184 GNKVCSMEKANVMESGILWRDVVTEIHAAEYADVELSHMYADAGAMQLVRAPKQFDVIVT 243

Query: 246 SNLFGDILSDECAMITGSMGMLPSASL-----NEQGFGLYEPAGGSAPDIAGKNIANPIA 300
            NLFGD+LSD  AM+TGS+GMLPSASL     N +   LYEP  GSAPDIAG+  ANP A
Sbjct: 244 DNLFGDLLSDAAAMLTGSLGMLPSASLGLPMENGRPKALYEPVHGSAPDIAGQGKANPCA 303

Query: 301 QILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDL--ARGAAAVSTDEMGDII 355
            ILS A+ LRYS D    A  +E A+N+ L +GIRT DL  A   A  ST +MGD +
Sbjct: 304 CILSFAMALRYSFDQGAEADRLEAAVNQVLAQGIRTADLMQAGDTAPASTSQMGDAV 360