Pairwise Alignments

Query, 783 a.a., DNA polymerase II (NCBI) from Escherichia coli BW25113

Subject, 787 a.a., DNA polymerase II from Pseudomonas fluorescens FW300-N2C3

 Score = 1096 bits (2835), Expect = 0.0
 Identities = 534/784 (68%), Positives = 632/784 (80%), Gaps = 3/784 (0%)

Query: 3   QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
           Q GF+LTRHWRDTP GTEV FWLATD GP +V L  Q SVAF+P  Q  + + +LQGE+ 
Sbjct: 4   QQGFVLTRHWRDTPAGTEVEFWLATDAGPRRVRLPVQTSVAFVPQIQRGQLEALLQGEKE 63

Query: 63  FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
             L PL L DF  +PV GLYC+ H QLM  +  LR  GV V+EAD+RPPERYLMERFIT+
Sbjct: 64  VELRPLDLLDFEHRPVLGLYCQQHAQLMRLDGTLRRAGVEVFEADIRPPERYLMERFITA 123

Query: 123 PVWVEGD-MHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
           PVW  G    +G +V+A++KP PDYRPPL+ VS+DIETT  G+LY I LEGCG+R VYML
Sbjct: 124 PVWFGGTPAADGLLVDAQMKPAPDYRPPLRLVSLDIETTAQGDLYSIALEGCGERQVYML 183

Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
           GP NGD S +DF+LEY  SR  LL+KLN WFA +DPD IIGWN+VQFDLR+L +HA R  
Sbjct: 184 GPPNGDDSGVDFQLEYCDSRTLLLKKLNDWFARFDPDAIIGWNLVQFDLRVLHEHARRLA 243

Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
           +PLRLGR   E++WREHG +N  FFA A GRLIIDGIE+L+SA W+F SFSLE VAQ LL
Sbjct: 244 VPLRLGRAGEEMQWREHGARNNHFFASAAGRLIIDGIESLRSATWSFPSFSLENVAQTLL 303

Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
           GEGKSIDNP+ RMDEI+R FAEDKPALA YNLK CELVT+IF KTE++ FLLERA+V GL
Sbjct: 304 GEGKSIDNPYQRMDEINRMFAEDKPALARYNLKGCELVTRIFAKTELLKFLLERASVTGL 363

Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
           P DR GGSVAAF HLY P MHR G+VAPNLG+ PP ASPGG+VMDS+PGLY+SVLVLDYK
Sbjct: 364 PADRSGGSVAAFTHLYMPLMHRQGFVAPNLGQRPPEASPGGFVMDSQPGLYESVLVLDYK 423

Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
           SLYPSIIRTFLIDPVGL+EG+  PD   S  GF  A FSR +HCLP IV  +  GR+ AK
Sbjct: 424 SLYPSIIRTFLIDPVGLIEGLRHPDDRESVPGFRGARFSRSRHCLPAIVARVSEGRETAK 483

Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
           R+ N PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGHQIM++T+ LIEAQG+ V
Sbjct: 484 REHNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHQIMQRTRQLIEAQGHVV 543

Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
           IYGDTDSTFVWL+ AH +EEAA+IGR LV HVN WW E ++ +  L SALEL++ETHF R
Sbjct: 544 IYGDTDSTFVWLRRAHGQEEAARIGRELVAHVNQWWREQVRAEFGLESALELQFETHFKR 603

Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
           FLMPTIRGA+ GSKKRYAGL+   D    +V+KGLETVRTDW+PLA+QFQQELY RIF  
Sbjct: 604 FLMPTIRGAEEGSKKRYAGLVTRADGSDEIVYKGLETVRTDWSPLARQFQQELYGRIFHR 663

Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
           +PYQEYVR+ + + +AG  D RLVYRKRLRRPL +Y+RNVPPHVRAARLADE NQ++GRP
Sbjct: 664 KPYQEYVRDYVQQTLAGAFDDRLVYRKRLRRPLEDYERNVPPHVRAARLADEFNQRQGRP 723

Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
            QYQN G I YV T  GPEP++ + +P+DY+HY+T+QLQPVA+ ILPF++D+F+TL+ GQ
Sbjct: 724 RQYQNGGWISYVITVAGPEPMEIRSAPIDYDHYVTKQLQPVADAILPFVDDDFSTLVGGQ 783

Query: 780 LGLF 783
           +GLF
Sbjct: 784 MGLF 787