Pairwise Alignments

Query, 783 a.a., DNA polymerase II (NCBI) from Escherichia coli BW25113

Subject, 787 a.a., DNA polymerase II from Vibrio cholerae E7946 ATCC 55056

 Score =  803 bits (2074), Expect = 0.0
 Identities = 420/794 (52%), Positives = 550/794 (69%), Gaps = 23/794 (2%)

Query: 3   QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
           + GF+LTRH RD    T++  WLAT +GP Q+T+  +  V FI   +   +Q +++    
Sbjct: 4   EQGFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFI---EQSASQEVMRIAAE 60

Query: 63  FRLTP----LALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMER 118
             +TP    L+L+ F  QP+   YC   R      ++L +  + + EAD+R  +R+LMER
Sbjct: 61  LSITPSLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLMER 120

Query: 119 FITSPVWVEGDM----HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCG 174
           FI   +   G +    H   +  A+ +   DY P L  VS+DIE +  G LY IGL+   
Sbjct: 121 FIQGSIEFTGQITDFGHYRQVQQAKCR-QGDYLPTLNMVSLDIECSEKGLLYSIGLDSPM 179

Query: 175 QRIVYMLG-PENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRML 233
              V M+G PE  +       +++V    QLL+ L AWF  +DPDVIIGW+VV FD R+L
Sbjct: 180 DSRVIMIGQPEPAETP-----IQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLL 234

Query: 234 QKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSL 293
            K AE ++L L +GR      +R    +    F    GR+++DGI+ LK+A ++F S+SL
Sbjct: 235 HKRAEFHKLKLTIGRAQQPSFFRTAS-QTQQGFISIPGRVVLDGIDTLKTATYHFRSWSL 293

Query: 294 ETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLL 353
           E+V+QELLGEGK+I N  DRMDEI++ F  DKP+LA YNL+DC LV +IF  T ++ F +
Sbjct: 294 ESVSQELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAI 353

Query: 354 ERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYD 413
           +R+ + G+ +DR GGSVAAF +LY P++HRAGYVAPNL      ASPGGYVMDS PGLYD
Sbjct: 354 QRSRLTGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYD 413

Query: 414 SVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQP---DPEHSTEGFLDAWFSREKHCLPEIV 470
           SVLVLD+KSLYPSIIR+FLIDP+GL+EG+  P     +H+  GF    F R KH LPE++
Sbjct: 414 SVLVLDFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMI 473

Query: 471 TNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQT 530
             +W  RDEAKR   K  SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM QT
Sbjct: 474 EKLWAARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQT 533

Query: 531 KALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSA 589
           K LIEA+GY VIYGDTDSTFV L G +S++EA  IG ALV+ +N WW E L Q+  LTS 
Sbjct: 534 KRLIEARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSI 593

Query: 590 LELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQ 649
           LELEYETH+ RFLMPTIRG++TGSKKRYAGL  +GD ++++FKGLE+ RTDWTPLAQ+FQ
Sbjct: 594 LELEYETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQ 653

Query: 650 QELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLA 709
            +LY  IF  +  + Y+R  +++ +AG+LD +LVY+KRLRR L EYQ+NVPP VRAAR+A
Sbjct: 654 HQLYQLIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQKNVPPQVRAARMA 713

Query: 710 DEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIE 769
           D+ N K GRPLQYQ RGTI+YV T NGPEP +Y +SP+DY+HY+ +QL+PVA+ ILPFI 
Sbjct: 714 DDINAKLGRPLQYQYRGTIEYVITVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIG 773

Query: 770 DNFATLMTGQLGLF 783
             F  L+  QLGLF
Sbjct: 774 KQFDELIAPQLGLF 787