Pairwise Alignments

Query, 553 a.a., RND family efflux transporter, MFP subunit from Kangiella aquimarina DSM 16071

Subject, 492 a.a., RND family efflux transporter, MFP subunit from Sphingomonas koreensis DSMZ 15582

 Score =  222 bits (566), Expect = 2e-62
 Identities = 137/404 (33%), Positives = 209/404 (51%), Gaps = 7/404 (1%)

Query: 44  LYWVAPMDPNYRRDKPGKSP-MGMDLVPVYEEAQDSESPGTVSISAAVENNIAVRTDTVK 102
           LYW  PM P+   DKPGKSP M M LVP Y +     +PG ++I  A   ++ +R  T +
Sbjct: 50  LYWYDPMVPSQHFDKPGKSPFMDMQLVPKYADEGAQGAPG-MAIDPARVQSLGLRVATAE 108

Query: 103 YGTLNNAIKTVGYVQFNQDQLIHIHPRVEGWVEKLFVKASGDPVKKDQPLYELYSPQLVN 162
            G L + +   G + FNQ  +  +  R  G+V++++ +A GD +    PL +L  P+   
Sbjct: 109 RGALASGLTATGTIDFNQRDVAIVQARAAGFVQRVYARAPGDVIGAGAPLADLLIPEWAG 168

Query: 163 AQEEYVLALKRNSGELIQAARNRLRALQLPESFIQQLGKKRQVKQTVTFYSPQDGVIDQL 222
           AQ EY+   +  +  L QAAR RL  L +P   I  + +  +    +T  +P  G I  L
Sbjct: 169 AQAEYLAVRRTGNPALAQAARQRLALLGMPPGTIAAVERGGRPHNVITIATPAGGTIKTL 228

Query: 223 SIREGFYVQPGTTMMSIGTLEQVWVEAEVFERQAELLKIGLPVTMSLDYFNGQSWKGEID 282
            +R+G  V  G T+  +  L  VW+ A V E  A  L+ G   T +L  + G+ + G + 
Sbjct: 229 GVRQGMTVTAGQTLAEVNGLATVWLNAAVPEALAGQLRPGQSATATLSAWPGERFTGRVA 288

Query: 283 YIYPSLDSTNRTLRVRIRFNNPDHKLKPNMFSQIVIHADSDKRQLLVPKEAVIRTQKQDR 342
            I P + + +RTL VRI   N   +L+P MF+  V    + +  LLVP EAVIRT K+  
Sbjct: 289 AILPDIQAESRTLTVRIELPNRGGRLRPGMFAS-VDFGGASRSALLVPSEAVIRTGKRTL 347

Query: 343 VVLDLGDGKFKSVEVLLGATGDKFFEVIEGLEEDDRVVTSAQFLIDSESSKSSDFKR--- 399
           V+L L  G+++  EV  G+      E++ GL + +++V S QFL+DSE+S SS   R   
Sbjct: 348 VMLALAGGRYQPAEVQAGSEAGGKTEILAGLSDGEKIVASGQFLLDSEASLSSVPARPIG 407

Query: 400 -LSQEDENESIWVEATINSVMAHHNMLNVSHGPVEQWQWPAMTM 442
             ++    +    EA         + + + HGPV   +WPAMTM
Sbjct: 408 GSARPPAAQPALYEAVGRIGKIDASGVTLDHGPVPALRWPAMTM 451