Pairwise Alignments

Query, 553 a.a., RND family efflux transporter, MFP subunit from Kangiella aquimarina DSM 16071

Subject, 487 a.a., RND family efflux transporter, MFP subunit from Sphingomonas koreensis DSMZ 15582

 Score =  226 bits (576), Expect = 2e-63
 Identities = 154/467 (32%), Positives = 232/467 (49%), Gaps = 18/467 (3%)

Query: 13  AIVGAVLGVSLSTWLGDSGSSTNNNAGPKEPLYWVAPMDPNYRRDKPGKSP-MGMDLVPV 71
           A++   +G  L+  LG     T    G K  LYW  PM P+ + DKPGKSP M M LVP 
Sbjct: 19  ALIAGGVGYGLAQ-LGAPWPKTAAEDGRKV-LYWYDPMVPSQQFDKPGKSPFMDMPLVPK 76

Query: 72  YEEAQDSESPGTVSISAAVENNIAVRTDTVKYGTLNNAIKTVGYVQFNQDQLIHIHPRVE 131
           Y + +   +PG + I  A   N+ +R   V+ G+L N++   G + FNQ  +  +  R  
Sbjct: 77  YAD-EAGAAPG-IRIDPARTQNLGLRAVMVERGSLANSLTATGVIDFNQRDVTIVQARAP 134

Query: 132 GWVEKLFVKASGDPVKKDQPLYELYSPQLVNAQEEYVLALKRNSGELIQAARNRLRALQL 191
           G+V++++ +A GD V    PL +L  P+   AQ EY+   +     L +AAR RL  L +
Sbjct: 135 GFVQRVYDRAPGDRVAAGAPLADLLIPEWAGAQTEYLAVRRTGDPALTRAARQRLALLGM 194

Query: 192 PESFIQQLGKKRQVKQTVTFYSPQDGVIDQLSIREGFYVQPGTTMMSIGTLEQVWVEAEV 251
           P   I  + ++ Q    VT  +P  GV+  L++R G  +  G T+  +  L  VW+ A +
Sbjct: 195 PPGTIAAVERRGQAHAVVTVSTPSAGVVRALNVRSGMTLAMGQTLAEVNGLATVWLNAAI 254

Query: 252 FERQAELLKIGLPVTMSLDYFNGQSWKGEIDYIYPSLDSTNRTLRVRIRFNNPDHKLKPN 311
            E  A  L  G  V+ +L  F  + + G +  I P L + +RTL  RI   N D +L+P 
Sbjct: 255 PEAMATQLMPGQQVSATLAAFPTERFSGRVAAILPDLQADSRTLTARIELPNRDGRLRPG 314

Query: 312 MFSQIVIHADSDKRQLLVPKEAVIRTQKQDRVVLDLGDGKFKSVEVLLGATGDKFFEVIE 371
           MF+  V     D+  LLVP EAVIRT K+  V+L L  G+++  E+  G       E++ 
Sbjct: 315 MFA-TVSFGGRDRPALLVPSEAVIRTGKRTLVMLVLPGGRYQPAEIQAGIESGGRTEILA 373

Query: 372 GLEEDDRVVTSAQFLIDSESSKSSDFKR-------LSQEDENESIWVEATINSVMAHHNM 424
           GL E ++V  S QFL+DSE+S S+   R       ++ +   E++     I+        
Sbjct: 374 GLAEGEKVAASGQFLLDSEASLSAIKARPMTAPAAMAPQSSYEAVGRIEKIDG-----TG 428

Query: 425 LNVSHGPVEQWQWPAMTMDLNTQEDLDLSQLKSGMTVHIEISKLSDG 471
           + +SHGPV   +WPAMTM             K G  VH    +  +G
Sbjct: 429 VTLSHGPVPALRWPAMTMRFRLGAPALAQGYKVGDRVHFAFDQQREG 475