Pairwise Alignments

Query, 662 a.a., Excinuclease ABC subunit B from Kangiella aquimarina DSM 16071

Subject, 733 a.a., Excinuclease ABC, B subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  773 bits (1997), Expect = 0.0
 Identities = 391/661 (59%), Positives = 504/661 (76%), Gaps = 7/661 (1%)

Query: 4   QFDIQSPFPPAGDQPKAIKQLLEGLEDGLSHQTLLGVTGSGKTYTMANVIAQSGRPAIIM 63
           +F + S + PAGDQP+AI +LL GL      Q LLGVTGSGKT+TMA VIA+ GRP +I+
Sbjct: 37  EFRLASDYQPAGDQPQAIAELLRGLAAQDRDQVLLGVTGSGKTFTMAQVIAEMGRPTLIL 96

Query: 64  APNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVAASDTFIEKDSSINEHIEQMR 123
           APNKTLAAQLYGE K FFP+NAVEYFVSYYDYYQPEAYV  +DT+IEKDSSINE I++MR
Sbjct: 97  APNKTLAAQLYGEFKNFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMR 156

Query: 124 LSATRALLERRDTIIVASVSAIYGLGDPKAFHSMVMHLKVGDAVDQRFILRRLAELQYTR 183
            +ATRALLERRD IIVASVS IYG+G  +++  M++ +KVG  + +  +L+ L ELQ+TR
Sbjct: 157 HAATRALLERRDVIIVASVSCIYGIGSVESYSRMIIPIKVGTTLPRADLLKALVELQFTR 216

Query: 184 NEFDLQRATYRVRGDLIDIYPAESEKHAIRIELFDDEVETIQTFDPLTGEVLKRLTRVTV 243
           N+    R  +RVRGD ++I+PA  E  A R+ L+ DE+E+++ FDPLTGE+   L  VTV
Sbjct: 217 NDIAFTRGMFRVRGDSVEIFPAHYEDRAWRVSLWGDEIESVREFDPLTGEITASLDEVTV 276

Query: 244 FPKSHYVTSRQTILDAIEQIKVDLKERLAQFYEQNKLVEAQRLEQRVKFDIEMMQELGYC 303
           +P SH+VT R  +  A+  IK +LKE LA+FY+Q K++EAQRLEQR  FD+EM++  G+C
Sbjct: 277 YPASHHVTPRPALSQAVRTIKAELKETLARFYDQGKVLEAQRLEQRTTFDLEMIEATGHC 336

Query: 304 SGIENYSRYLSGAQPGEPPPCLLDYLPPDALMIIDESHVTVSQIGAMYKGDRSRKETLVN 363
             IENYSR+L+G +PG+PPP L +YLP DAL+ +DESHV V QIG M++GD +RK  L  
Sbjct: 337 KSIENYSRHLTGRRPGDPPPTLFEYLPEDALLFVDESHVAVPQIGGMFRGDFNRKSVLAE 396

Query: 364 YGFRLPAALDNRPLRFEEFERISPQTVFVSATPGKYEEEHSGQVV-EQVVRPTGLIDPEV 422
           +GFRLP+ +DNRPL+FEE++ + P ++FVSATPG++E E +G VV EQV+RPTGL+DP  
Sbjct: 397 FGFRLPSCVDNRPLKFEEWDVMRPPSIFVSATPGRWELERTGGVVAEQVIRPTGLVDPVC 456

Query: 423 EVRPVGTQVDDLLSEIHLRVEKNERVLVTTLTKKMAEDLTDYLSEHGVRVRYLHSDIDTV 482
            +RPV  QVDDLL E+     + ERVLVTTLTK+M+EDLT+YL+E GVRVRY+HSDI+T+
Sbjct: 457 IIRPVEAQVDDLLGEVKACAARGERVLVTTLTKRMSEDLTEYLTEQGVRVRYMHSDIETL 516

Query: 483 ERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 542
           ER+EIIRDLRLG FDVLVGINLLREGLD+PE +LVAILDADKEGFLRS  SLIQTIGRAA
Sbjct: 517 ERIEIIRDLRLGAFDVLVGINLLREGLDIPECALVAILDADKEGFLRSRTSLIQTIGRAA 576

Query: 543 RNLSGKAILYADRITGSMERAIGETNRRRAIQQEFNEKHGITPIGVSKKITDVMDTGHSK 602
           RN+ G+ ILYAD++T S+  AI ET+RRR  QQ++N  HGITP  V  +I+DV+ + + K
Sbjct: 577 RNVGGRVILYADKMTDSLTFAIEETSRRRQRQQDYNAAHGITPETVRSRISDVLSSVYEK 636

Query: 603 KSRKVAEKL---DQYKVKSLADAVKEIAQMEKQMLEYAKNLEFEKAAKLRDEIEKLRDAS 659
               V   +   +Q   KSL +    +A ++K+M   A +LEFE+A +LRDEI +L    
Sbjct: 637 DYVTVTTGVSGDNQLVGKSLRE---HLADLDKRMRAAAADLEFEEAGRLRDEIRRLEALD 693

Query: 660 L 660
           L
Sbjct: 694 L 694