Pairwise Alignments

Query, 662 a.a., Excinuclease ABC subunit B from Kangiella aquimarina DSM 16071

Subject, 690 a.a., excinuclease ABC, B subunit from Dechlorosoma suillum PS

 Score =  936 bits (2418), Expect = 0.0
 Identities = 464/656 (70%), Positives = 555/656 (84%), Gaps = 4/656 (0%)

Query: 5   FDIQSPFPPAGDQPKAIKQLLEGLEDGLSHQTLLGVTGSGKTYTMANVIAQSGRPAIIMA 64
           + +  PFPPAGDQP+AI+ L+EGLEDGLS+QTLLGVTGSGKTYTMANVIA++GRPA+I+A
Sbjct: 21  YRLHQPFPPAGDQPEAIRLLVEGLEDGLSYQTLLGVTGSGKTYTMANVIARTGRPALILA 80

Query: 65  PNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVAASDTFIEKDSSINEHIEQMRL 124
           PNKTLAAQLY E +EF P NAVEYFVSYYDYYQPEAYV + D FIEKDSSIN+HIEQMRL
Sbjct: 81  PNKTLAAQLYAEFREFLPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSINDHIEQMRL 140

Query: 125 SATRALLERRDTIIVASVSAIYGLGDPKAFHSMVMHLKVGDAVDQRFILRRLAELQYTRN 184
           SAT++LLERRD +IVA+VS IYG+GD   +H+M++HL+ GD   QR I++RL+E+QY RN
Sbjct: 141 SATKSLLERRDVVIVATVSCIYGIGDKDDYHNMILHLRQGDKAGQRDIIKRLSEMQYERN 200

Query: 185 EFDLQRATYRVRGDLIDIYPAESEKHAIRIELFDDEVETIQTFDPLTGEVLKRLTRVTVF 244
           E D QR T+RVRGD+IDI+PAE  +HAIR+ LFDDE+ET+Q FDPLTG +L +L R T++
Sbjct: 201 EVDFQRGTFRVRGDVIDIFPAEHAEHAIRVCLFDDEIETLQLFDPLTGHLLHKLPRFTIY 260

Query: 245 PKSHYVTSRQTILDAIEQIKVDLKERLAQFYEQNKLVEAQRLEQRVKFDIEMMQELGYCS 304
           P SHYVT R T+L A+E IK +L++RL  F+++ +LVEAQR+EQR +FD+EM+ ELG+C 
Sbjct: 261 PSSHYVTPRATVLRAVEGIKEELRKRLEFFHKEQRLVEAQRIEQRTRFDLEMLNELGFCK 320

Query: 305 GIENYSRYLSGAQPGEPPPCLLDYLPPDALMIIDESHVTVSQIGAMYKGDRSRKETLVNY 364
           GIENYSR+LSG +PGE PP LLDYLPPDALM IDESHV + Q+GAMYKGDRSRKE LV+Y
Sbjct: 321 GIENYSRHLSGRKPGEAPPTLLDYLPPDALMFIDESHVAIGQVGAMYKGDRSRKENLVDY 380

Query: 365 GFRLPAALDNRPLRFEEFERISPQTVFVSATPGKYEEEHSGQVVEQVVRPTGLIDPEVEV 424
           GFRLP+ALDNRPL+FEEFER+  QT+FVSATP  YE++H GQVVEQVVRPTGLIDP V V
Sbjct: 381 GFRLPSALDNRPLKFEEFERLMRQTIFVSATPSDYEKQHQGQVVEQVVRPTGLIDPVVLV 440

Query: 425 RPVGTQVDDLLSEIHLRVEKNERVLVTTLTKKMAEDLTDYLSEHGVRVRYLHSDIDTVER 484
           RP  TQVDDLLSEI  R+  +ERVLVTTLTK+MAEDLTDYL E+G++VRY+HSDIDTVER
Sbjct: 441 RPAMTQVDDLLSEIRKRIAVSERVLVTTLTKRMAEDLTDYLRENGIKVRYVHSDIDTVER 500

Query: 485 MEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARN 544
           +EIIRDLRLGEFDVLVGINLLREGLD+PEVSLVAILDADKEGFLRSERSLIQTIGRAAR+
Sbjct: 501 VEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARH 560

Query: 545 LSGKAILYADRITGSMERAIGETNRRRAIQQEFNEKHGITPIGVSKKITDVMDTGH---- 600
           L+G AILYADR+T SM RA+ ET RRRA Q   NE HGITP GVSK+I D++D  +    
Sbjct: 561 LNGTAILYADRVTDSMRRAMDETERRRAKQMAHNEAHGITPKGVSKRIKDIIDGVYDPDA 620

Query: 601 SKKSRKVAEKLDQYKVKSLADAVKEIAQMEKQMLEYAKNLEFEKAAKLRDEIEKLR 656
           ++K  K A++   Y+  S  +  KEI ++EKQMLE AKNLEFEKAA  RDE+ +L+
Sbjct: 621 AQKELKAAQQQAVYETMSEKNLAKEIKRLEKQMLESAKNLEFEKAAAARDELFRLK 676