Pairwise Alignments

Query, 267 a.a., ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) from Kangiella aquimarina DSM 16071

Subject, 404 a.a., ribosomal large subunit pseudouridine synthase B from Azospirillum brasilense Sp245

 Score =  160 bits (405), Expect = 4e-44
 Identities = 103/248 (41%), Positives = 137/248 (55%), Gaps = 15/248 (6%)

Query: 3   EKLQKILANAGLGSRREIEKWIEGGRVSVNGSIAKLGERATDK-DTIRVDGRIINIKSSE 61
           E++ K LA AGL SRR+ E+WI  GRV+VNG+            D ++VDG++I     E
Sbjct: 27  ERIAKRLARAGLCSRRDAERWITDGRVAVNGTTLDSPACVVRSGDVVQVDGKVI----PE 82

Query: 62  ETYTRVLAYNKPLGEVSTKKDPEGRPTVFDNLPKTSFGRWISIGRLDINTTGLLLFTNNG 121
               R+  Y KP G V+T +D +GR TVF+ LP     R IS+GRLD+ T GLLL TN+G
Sbjct: 83  PEPARLWRYYKPSGLVTTARDEKGRTTVFERLPP-DMPRVISVGRLDLTTEGLLLLTNDG 141

Query: 122 ELAHRLMHPSYQVERKYAVRVHGEVTPEMINNLKKGVLIEGDMCQFTYVQEKGGEGANTW 181
           ELA  L  P+    R+Y VRV GEV    +  L KG  IEG             +G N W
Sbjct: 142 ELARFLELPATGWTRRYRVRVFGEVNEVKLAELAKGPTIEGVKYGPIEAVLDRIQGRNAW 201

Query: 182 YEVGLAEGKNREVRKLWESQGLEVSRLMRIQYGPINLPQRLSRGRWIDLDEQEIRDLAKL 241
             V L EGKNRE+RK+ E+  L+V+RL+R+ YGP  L +         L+E  + ++ K 
Sbjct: 202 LTVSLKEGKNREIRKVMEALDLQVNRLIRVAYGPFQLGK---------LEESAVEEVPKR 252

Query: 242 VQLEVTPR 249
           V  E   R
Sbjct: 253 VVREQVSR 260