Pairwise Alignments

Query, 267 a.a., ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) from Kangiella aquimarina DSM 16071

Subject, 243 a.a., ribosomal large subunit pseudouridine synthase B from Synechococcus elongatus PCC 7942

 Score =  151 bits (381), Expect = 1e-41
 Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 4/244 (1%)

Query: 1   MSEKLQKILANAGLGSRREIEKWIEGGRVSVNGSIAKLGERA-TDKDTIRVDGRIINIKS 59
           M+E+LQKIL+  G+ SRR+ E+WI+ GRV++NG +A++G++A   +D I +DG+ +  K 
Sbjct: 1   MAERLQKILSQLGVASRRQAEQWIQQGRVTINGRVAEIGQQADLKRDRIHLDGKRLRPKH 60

Query: 60  SEETYTRVLAYNKPLGEVSTKKDPEGRPTVFDNLPKTSFGRWISIGRLDINTTGLLLFTN 119
             E   R L  +KP+G VST +DP+ R TV D +          +GRLD +++GLLL  N
Sbjct: 61  RPE--ARYLLLHKPVGVVSTCRDPQRRRTVIDLVDPEFRPGLHPVGRLDTDSSGLLLLCN 118

Query: 120 NGELAHRLMHPSYQVERKYAVRVHGEVTPEMINNLKKGVLIEGDMCQFTYVQEKGGEGAN 179
           +GEL +++ HP + +E+ Y V V G     ++ + + GV ++        V+       +
Sbjct: 119 DGELTYQISHPRFHIEKTYRVWVEGHPPASVLEHWRSGVWLDDYQTLPAGVRILHDRAES 178

Query: 180 TWYEVGLAEGKNREVRKLWESQGLEVSRLMRIQYGPINLPQRLSRGRWIDLDEQEIRDLA 239
           T  EV L EG+NR++R++ E  G  V RL R+  GP+ L   L  G +  L   E+  L 
Sbjct: 179 TLLEVILHEGRNRQIRRVAEQLGHPVLRLTRVAIGPLRLGS-LQPGEYRSLTAAEVYRLR 237

Query: 240 KLVQ 243
           +L Q
Sbjct: 238 QLAQ 241