Pairwise Alignments

Query, 267 a.a., ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) from Kangiella aquimarina DSM 16071

Subject, 400 a.a., pseudouridine synthase from Sphingomonas koreensis DSMZ 15582

 Score =  162 bits (410), Expect = 1e-44
 Identities = 94/219 (42%), Positives = 135/219 (61%), Gaps = 10/219 (4%)

Query: 3   EKLQKILANAGLGSRREIEKWIEGGRVSVNGSIAKLGERATDKDTIR---VDGRIINIKS 59
           E++ K+LA AG+ SRREIE+ I  GRV+++G I  L   AT   ++R   VDG  +   +
Sbjct: 14  ERIAKLLARAGIASRREIERMIADGRVAIDGEI--LTTPATVLPSLRGVTVDGNPVAAAA 71

Query: 60  SEETYTRVLAYNKPLGEVSTKKDPEGRPTVFDNLPKTSFGRWISIGRLDINTTGLLLFTN 119
                 R+  ++KP G ++T++DP GRPT++  LPK    R + +GRLD+NT GLLL T 
Sbjct: 72  P----ARLFRFHKPSGLLTTERDPGGRPTIYSKLPK-GLPRLMPVGRLDLNTEGLLLMTT 126

Query: 120 NGELAHRLMHPSYQVERKYAVRVHGEVTPEMINNLKKGVLIEGDMCQFTYVQEKGGEGAN 179
           +GEL  +L  P+  VER Y  R +GEV+   + +L  G+ I+G          +   GAN
Sbjct: 127 DGELKRQLELPATGVERSYRARAYGEVSQAQLEDLMLGIEIDGVRYGSIDANLERRTGAN 186

Query: 180 TWYEVGLAEGKNREVRKLWESQGLEVSRLMRIQYGPINL 218
            W E+ L EGKNREVR++ E  GL+VSRL+R +YGP +L
Sbjct: 187 VWIELTLTEGKNREVRRVLEHLGLKVSRLIRTRYGPFHL 225