Pairwise Alignments

Query, 947 a.a., Signal transduction histidine kinase from Kangiella aquimarina DSM 16071

Subject, 1236 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  315 bits (808), Expect = 9e-90
 Identities = 210/535 (39%), Positives = 310/535 (57%), Gaps = 22/535 (4%)

Query: 283  NNLELDIARRQALEASRVKTEFLANMSHEIRTPMNGVIGFTELLLKTELNNKQKDFLFDI 342
            N + L  A++ A  A+  K+EFLANMSHEIRTPMN +IG  +L  +T L  +QKD+L   
Sbjct: 704  NEVALLEAKQDAELANLYKSEFLANMSHEIRTPMNAIIGMLQLAGRTSLTEQQKDYLDKA 763

Query: 343  KRSATSLLSIIDDILDYSKIEAGKMSFERYPFDLRECVDDIFRMLGPNANKKGIELVSLI 402
              SA SLL II+DILD+SKIEAGK+  E+  F L + +D    +    A +KGIEL  L+
Sbjct: 764  SFSAQSLLRIINDILDFSKIEAGKLELEKVAFPLDKVLDHSLDLNALRAQEKGIEL--LL 821

Query: 403  YSDVPKALL--GDPIRIKQIITNLVNNAIKFTKSGSVELYAEVESENKKGLKLKIQVKDS 460
            Y+ V   ++  GDP+R+ Q++ NL++NA+KFT++G +EL  E   E    + LK  V+D+
Sbjct: 822  YAPVSAGIMLKGDPLRLGQVLINLLSNAVKFTQNGEIELGCEDVGERDHRITLKFWVRDT 881

Query: 461  GIGLTQEQQRNLFKAFSQADSSTKREFGGTGLGLVISKSLVEKMGGNIGVNSNQGEGSTF 520
            GIG+++EQQ  LF AF+QAD ST R++GGTGLGL ISK LV  MGG + V S  G GSTF
Sbjct: 882  GIGISREQQDKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGTMQVESEPGVGSTF 941

Query: 521  WFTLQCE-RTDALPEDGLTGEFLANKSVLVFDPHPSTRLSITQILEEWGMLVRSFE-KID 578
             FT+  E   +A     +  E LA+   LV D +P+        L+ +  ++R F  +++
Sbjct: 942  SFTVSFEIAEEAKVVPMVVPERLASLRTLVVDDNPTA-------LQIYSSVMRDFHFEVE 994

Query: 579  DLMTEID-LYSQSGKSIELIIIGGQRFRRRQQQLEYICNK--AQTQLYC-PIITFTTAGN 634
               T  + LY    + ++L+++          Q+    ++  A+ +L   P+I   TA  
Sbjct: 995  TASTGAEALYKLCKQQVDLVLLDWMMPEMDGIQVIDAIDEMVAEGKLAARPVIIIMTAYA 1054

Query: 635  ADFLE-HLHSIGVNRAMTKPVTHRALYNSLIELLKTPSIHSGKEPAEAPVGDASLLKDIY 693
            A+ L+  L S  V   + KP    +L++ +I     P+  +   P   PV D    + + 
Sbjct: 1055 AEPLKVDLDSDRVFAMLQKPFKASSLFDEIIRAFAPPAPKALPAP---PVEDEGEHQGV- 1110

Query: 694  VLAVDDNPANLRLVTTLLQDLNIKVDAAESGMQAVSLSKNKVYDAILMDIQMPEMDGLEA 753
            VL V+DN  N ++ T LL+    +VD A++G  ++ +   + YDAILMDIQMP MDGL A
Sbjct: 1111 VLLVEDNFINQQVATELLKSAGYEVDVADNGQISLEMVGKRSYDAILMDIQMPVMDGLTA 1170

Query: 754  TRTIRANRTNLNTPIIALTAHAMASEREQLLEAGMDDYMTKPVSEQALVNLLLKW 808
               +R   +    PIIA+TAHAM+ +RE+ L AGM+ ++TKP+    L   L  W
Sbjct: 1171 ATELRKRYSFDELPIIAMTAHAMSGDREKSLAAGMNAHITKPIVLNELFETLSHW 1225